Ictalurus punctatus (channel catfish): 108279439
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Entry
108279439 CDS
T04658
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108279439
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108279439
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
I-set
Ig_3
LRR_1
fn3
ig
LRR_Zer-1
LRR_EndoS
Ig_2
Pur_ac_phosph_N
LRRCT
Fn3_ELFN
LRRNT
Motif
Other DBs
NCBI-GeneID:
108279439
NCBI-ProteinID:
XP_017349180
Ensembl:
ENSIPUG00000014248
UniProt:
A0A2D0T3K7
LinkDB
All DBs
Position
19:15817758..15830177
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AA seq
706 aa
AA seq
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MKDKSFVDYFVLAFVMANFVLAVEDKGSCPKLCVCETRPWFSPSSAYMEAPTVDCNDLGL
FNLPLRLPTDTRVILLQTNNIAKIENSMEYLPNITEIDLSQNNLSSISDINLGHLPHLLS
LHIEENWICSLPDNALSQLGNLQELYLNHNLISYISPEAFSGLYNLLRLHLNSNKLQSIS
SEWFKSLSNLDILMIGENPVASIQDMNFKPLRNLRSLVLTRMNLSQIPDNALAGLDNLES
ISFYDNTFPEVPHRALKHLKNLKFLDLNKNPIGRIQKGDFMDMLHLKELGINSMPELVSI
DSFAVNNLPELTKIEATNNPKLSYIHPKAFYKLPRLETLMLNSNALTAIHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQIHFREMTEICL
PLISPDSLPTQVAVGNGSSLSLHCRAFAEPEPDIYWVTPYGNRILPNMVADKFYMHPEGT
LDIYDITDGEAGLYTCVAHNLVGADLKSVSVEVSGYFPQPTSGSLDVIIQSVQTNSVLVS
WTTSHGSLAPNIKWYTTSSSSHPTVAFTARVPSDTRMYNLTHLTPATQYKVCVDIHNINS
KHNTKCVNVTTKVLVQLAKDIEKWDTTVITMLCVLLTIISVACLLICMFQKKYHHYMELR
RCPSKTALIPEAGTQSAFTRVWVSGNGMPAAVEVKATVINVLDNSF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataaatcatttgtggattattttgttctggcgtttgtgatggctaactttgtt
cttgctgtggaggacaaaggcagttgtcctaaactttgtgtgtgtgagactaggccatgg
ttttccccaagctctgcttatatggaggcccctaccgttgactgtaatgatttgggactt
ttcaacctaccattaagattacctactgatacaagagttattttactccagaccaataac
attgctaaaatcgagaactctatggagtacttgcctaatatcactgagattgatctttca
caaaacaacctatcctcaataagtgacatcaatttgggccatcttcctcacttgttgtcc
ctgcacatagaagaaaactggatatgctccttaccagataatgcactttcccaacttggc
aaccttcaggaactttacctaaaccacaacctcatctcctacatttcacctgaggctttc
agtgggctttacaatttacttagactgcatctcaactcgaacaagctccagagcataagc
agtgagtggtttaagtccctgtccaatctggatattctcatgattggggaaaaccctgtc
gcttccatacaggacatgaattttaagcccttgagaaacttgcgaagtcttgtcctaacc
agaatgaacttatcccagattccagataatgcactggcaggcctggacaatttggagagc
atttcattctatgacaacactttccctgaagttccccaccgtgctcttaagcatcttaag
aacctcaaatttttggaccttaataagaacccaattgggagaatacagaagggtgacttc
atggacatgttgcatcttaaagaactgggcatcaacagcatgccagagctggtgtccatc
gacagctttgctgtcaacaacctcccagagttgacaaagattgaggctaccaacaatcca
aaattatcctacattcatcccaaagccttctacaaacttcctaggctggagactctcatg
ctgaacagtaatgccctcacagctatacacaggatcacagtagagtctctgcccaatctg
cgtgaggtcagcatgcattccaatcccatccgctgtgactgtgtggtgcgctggatgaat
atgaataaaaccaacatacgcttcatggagcctgactccttgttttgtgtggaaccacct
gaatatgaaggtcagcatgtgcgacagattcacttcagggagatgacggagatctgtctg
cctcttatctctccagacagcctgcctactcaggttgctgtgggaaacgggagctcattg
tccctgcattgccgggcctttgctgaacctgagcctgatatctactgggttacaccttat
gggaacaggatcctccccaacatggtggcagataagttttacatgcaccctgagggcaca
ctcgacatttatgacattactgatggggaggctggactctacacttgtgtggcacacaat
cttgttggtgcggacctgaaatctgtctctgtggaagtcagtggatactttccacagcct
accagtggctctctagatgtcatcatccagtctgtgcagaccaactcagtcctcgtgtcc
tggacaacctctcatggcagcctggcaccaaatattaagtggtatacaacgtccagttcc
agccatccaactgtggccttcacagccagggtcccgtctgacacgaggatgtataatctc
acacatctcactccagccacacagtataaggtgtgtgtagacatccacaacatcaacagt
aaacacaataccaagtgtgtcaatgtaacaacaaaagtattagtgcagcttgccaaggat
attgagaagtgggataccacagtgatcactatgttatgtgtgcttctcaccatcatctca
gtggcttgcctgctgatttgtatgtttcagaaaaagtatcaccattatatggagcttagg
agatgcccatccaaaacagcattgatacctgaggctggaacccagtctgcatttacaagg
gtctgggtatctgggaatgggatgccggctgctgtggaagtgaaagctactgtcataaat
gtgttggacaattccttctaa
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