Ictalurus punctatus (channel catfish): 108279461
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Entry
108279461 CDS
T04658
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a isoform X1
KO
K06493
integrin beta 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03266
Virion - Herpesvirus
ipu04081
Hormone signaling
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04517
IgSF CAM signaling
ipu04518
Integrin signaling
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
108279461 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108279461 (itgb3a)
04512 ECM-receptor interaction
108279461 (itgb3a)
04517 IgSF CAM signaling
108279461 (itgb3a)
04518 Integrin signaling
108279461 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108279461 (itgb3a)
04148 Efferocytosis
108279461 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108279461 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108279461 (itgb3a)
04810 Regulation of actin cytoskeleton
108279461 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108279461 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279461 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108279461 (itgb3a)
04515 Cell adhesion molecules [BR:
ipu04515
]
108279461 (itgb3a)
04090 CD molecules [BR:
ipu04090
]
108279461 (itgb3a)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108279461 (itgb3a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108279461 (itgb3a)
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin beta subunits
108279461 (itgb3a)
CD molecules [BR:
ipu04090
]
Proteins
108279461 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_integrin
EGF_2
PSI_integrin
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
108279461
NCBI-ProteinID:
XP_017349218
Ensembl:
ENSIPUG00000024190
UniProt:
W5URS2
LinkDB
All DBs
Position
2:complement(31771828..31791317)
Genome browser
AA seq
787 aa
AA seq
DB search
MGMFLPHIWTVLAVLTALSTVSGSNICTSRGVGTCKECLSVHPSCAWCSQKDMDPSSSSV
SRCDLKSILLQSGCKAEFIESPVSSIVVEEDRPLSDRAQGSTGDITQIRPQRIQLTLRPD
DSKRFTVTVRQVSDYPVDLYYLMDLSYSMKDDLNSLRSLGSALAEAMGSKTSNLQMGFGA
FVDKTLSPYMYMFPDEAISNPCLGIATTCSRQFGYKNVLSLTEQVTRFTEEVKKQEVSRN
RDSPEGGFDAIMQAVVCKDKIGWRPDASHLLVFTTDATSHIALDGRIAGLVQPNDGQCYV
NNDNIYAKTAILDYPSIGMLTDKLAENNINLIFAVTENVVPLYLNYSKLIPGTTVGKLSY
DSKNVIELILDAYANIRSKAELEVLNVPDELSLSFNATCLNGELVPGVRSCSGLKIGDTV
SFSVEAKLRSCPKVKSHTFSIKPLGFKETLQVTVNFACNCSCQDSAQPASPTCNNGTLEC
GVCRCDSGRLGPHCECTEADFNPNDTDSCKPSPGAAICNGRGDCVCGQCSCHSRDFGKVW
GKYCECDDFSCIRSKGQLCSGHGDCVCGFCQCYPGWSGESCNCSTRTDTCMASIDLLCSG
RGECLCGVCSCSLPGAYGATCEKCPTCPDSCTLKKDCVECKHYKRGPLFEKKSCNTAICR
DEIQLVDELAFHEKSALNCSYKDEDDCIHHFQYYEDISGKSILYLVKEPECPKGPDILVV
VGSVIGSIFLLGLAALLVWKLLVSIHDRREFAKFEEERAKAKWEAGNNPLYKGATTTFTN
VTYSGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtttttgcctcatatttggacagtcctggctgttctaacagcactttctaca
gtttcaggctcaaacatatgtacctccagaggtgttggaacctgcaaagaatgtttgtcc
gttcatccgtcttgcgcttggtgttctcagaaagacatggatcccagcagctccagtgtt
tcccgttgtgacctaaagtccatcttgctccagtctggatgtaaagcagagtttattgag
tctccagttagtagcattgtagtggaagaggaccgccccctcagtgaccgcgctcaaggc
tcgactggtgacatcactcagattcgaccacagcgcattcagctgaccttgaggccagat
gactcgaaacgttttacagtgaccgttcggcaggtctctgattaccctgtagacctctac
tacctgatggatttgtcctattctatgaaagatgacttaaacagcctccgctccctcggc
agtgctctggctgaagctatgggtagtaaaactagtaacctgcaaatggggtttggggca
tttgtggacaaaacactctcaccgtacatgtatatgtttccagacgaggccataagcaat
ccctgccttggcattgccactacctgctcacggcaattcggttataagaacgtcctgtca
cttacggagcaggttactcgtttcacagaggaagtgaaaaaacaggaagtatcacggaac
agagactcaccagaaggaggatttgatgcaatcatgcaggctgtggtctgcaaggataaa
attgggtggcggcctgatgcatcccacctcctggtgttcactacagatgctacaagccac
attgcgctggatggcagaatcgcaggccttgtccagcccaatgacggacaatgttatgtt
aataatgacaacatctatgccaagactgctatcctggactatccctccattggaatgctc
actgacaaactggctgagaataatattaacctcatctttgcagtaactgagaatgtggta
cctctgtacctaaattacagtaagttgattcctggtaccactgttgggaaactgtcttat
gactcgaaaaatgtcatcgaactcatcctggatgcgtatgcgaatatcaggtcaaaggca
gagttggaggtgttgaatgttccggatgagctgagcttgtcgtttaatgccacatgcctc
aacggagagttagtacccggcgttagatcctgctcaggacttaaaataggagacacggtg
tcattcagtgtagaggcaaagctccgtagctgtccaaaagtgaagagtcatacattcagc
atcaaacctctaggttttaaagaaacactccaggtgaccgtcaatttcgcatgcaactgc
tcatgccaagattctgcccagcctgctagccccacctgtaataatggcacactggagtgc
ggtgtgtgtcggtgtgactcaggacgcctagggccacattgcgaatgcaccgaggccgac
ttcaatcccaacgacacagacagctgtaaaccctcccctggtgcagctatctgcaatgga
cgaggcgactgcgtgtgcggccaatgtagctgtcactcaagagactttgggaaggtgtgg
ggcaaatactgtgagtgtgacgacttcagctgcatccgatccaaagggcaactttgttct
ggtcatggtgattgtgtatgtgggttctgtcagtgctatcctggctggtcaggcgagagc
tgtaattgttccacaaggacggacacttgcatggccagcattgatctgctgtgtagcggc
cgtggtgagtgtttgtgcggtgtgtgttcatgcagcctgcctggagcatacggtgccacc
tgtgagaaatgtcccacctgccccgactcctgcaccttgaaaaaggactgtgtggagtgt
aagcactataagagaggaccactgtttgagaagaaaagctgcaacactgcaatctgcaga
gatgaaatccagttggtggatgagctagccttccatgagaagagcgcgttgaactgcagc
tacaaagatgaggatgactgcattcatcacttccagtactatgaagacatcagtggaaaa
tccattctctacctcgttaaagaacccgagtgtcctaaaggtcctgatattctggtagtg
gtgggttctgtcattggctccatcttcttgctgggcttggctgctctgctggtttggaag
ctgctggtcagtattcatgaccgccgagaatttgccaagtttgaggaagaaagagctaag
gccaagtgggaagcgggtaataacccattgtataaaggagctacaactacttttacaaac
gtgacgtacagtggcaactcctaa
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