Ictalurus punctatus (channel catfish): 108279461
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Entry
108279461 CDS
T04658
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a isoform X1
KO
K06493
integrin beta 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03266
Virion - Herpesvirus
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
108279461 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108279461 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108279461 (itgb3a)
04148 Efferocytosis
108279461 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108279461 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108279461 (itgb3a)
04810 Regulation of actin cytoskeleton
108279461 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108279461 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279461 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108279461 (itgb3a)
04515 Cell adhesion molecules [BR:
ipu04515
]
108279461 (itgb3a)
04090 CD molecules [BR:
ipu04090
]
108279461 (itgb3a)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108279461 (itgb3a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108279461 (itgb3a)
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin beta subunits
108279461 (itgb3a)
CD molecules [BR:
ipu04090
]
Proteins
108279461 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_2
Motif
Other DBs
NCBI-GeneID:
108279461
NCBI-ProteinID:
XP_017349218
Ensembl:
ENSIPUG00000024190
UniProt:
W5URS2
LinkDB
All DBs
Position
2:complement(31771828..31791317)
Genome browser
AA seq
787 aa
AA seq
DB search
MGMFLPHIWTVLAVLTALSTVSGSNICTSRGVGTCKECLSVHPSCAWCSQKDMDPSSSSV
SRCDLKSILLQSGCKAEFIESPVSSIVVEEDRPLSDRAQGSTGDITQIRPQRIQLTLRPD
DSKRFTVTVRQVSDYPVDLYYLMDLSYSMKDDLNSLRSLGSALAEAMGSKTSNLQMGFGA
FVDKTLSPYMYMFPDEAISNPCLGIATTCSRQFGYKNVLSLTEQVTRFTEEVKKQEVSRN
RDSPEGGFDAIMQAVVCKDKIGWRPDASHLLVFTTDATSHIALDGRIAGLVQPNDGQCYV
NNDNIYAKTAILDYPSIGMLTDKLAENNINLIFAVTENVVPLYLNYSKLIPGTTVGKLSY
DSKNVIELILDAYANIRSKAELEVLNVPDELSLSFNATCLNGELVPGVRSCSGLKIGDTV
SFSVEAKLRSCPKVKSHTFSIKPLGFKETLQVTVNFACNCSCQDSAQPASPTCNNGTLEC
GVCRCDSGRLGPHCECTEADFNPNDTDSCKPSPGAAICNGRGDCVCGQCSCHSRDFGKVW
GKYCECDDFSCIRSKGQLCSGHGDCVCGFCQCYPGWSGESCNCSTRTDTCMASIDLLCSG
RGECLCGVCSCSLPGAYGATCEKCPTCPDSCTLKKDCVECKHYKRGPLFEKKSCNTAICR
DEIQLVDELAFHEKSALNCSYKDEDDCIHHFQYYEDISGKSILYLVKEPECPKGPDILVV
VGSVIGSIFLLGLAALLVWKLLVSIHDRREFAKFEEERAKAKWEAGNNPLYKGATTTFTN
VTYSGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtttttgcctcatatttggacagtcctggctgttctaacagcactttctaca
gtttcaggctcaaacatatgtacctccagaggtgttggaacctgcaaagaatgtttgtcc
gttcatccgtcttgcgcttggtgttctcagaaagacatggatcccagcagctccagtgtt
tcccgttgtgacctaaagtccatcttgctccagtctggatgtaaagcagagtttattgag
tctccagttagtagcattgtagtggaagaggaccgccccctcagtgaccgcgctcaaggc
tcgactggtgacatcactcagattcgaccacagcgcattcagctgaccttgaggccagat
gactcgaaacgttttacagtgaccgttcggcaggtctctgattaccctgtagacctctac
tacctgatggatttgtcctattctatgaaagatgacttaaacagcctccgctccctcggc
agtgctctggctgaagctatgggtagtaaaactagtaacctgcaaatggggtttggggca
tttgtggacaaaacactctcaccgtacatgtatatgtttccagacgaggccataagcaat
ccctgccttggcattgccactacctgctcacggcaattcggttataagaacgtcctgtca
cttacggagcaggttactcgtttcacagaggaagtgaaaaaacaggaagtatcacggaac
agagactcaccagaaggaggatttgatgcaatcatgcaggctgtggtctgcaaggataaa
attgggtggcggcctgatgcatcccacctcctggtgttcactacagatgctacaagccac
attgcgctggatggcagaatcgcaggccttgtccagcccaatgacggacaatgttatgtt
aataatgacaacatctatgccaagactgctatcctggactatccctccattggaatgctc
actgacaaactggctgagaataatattaacctcatctttgcagtaactgagaatgtggta
cctctgtacctaaattacagtaagttgattcctggtaccactgttgggaaactgtcttat
gactcgaaaaatgtcatcgaactcatcctggatgcgtatgcgaatatcaggtcaaaggca
gagttggaggtgttgaatgttccggatgagctgagcttgtcgtttaatgccacatgcctc
aacggagagttagtacccggcgttagatcctgctcaggacttaaaataggagacacggtg
tcattcagtgtagaggcaaagctccgtagctgtccaaaagtgaagagtcatacattcagc
atcaaacctctaggttttaaagaaacactccaggtgaccgtcaatttcgcatgcaactgc
tcatgccaagattctgcccagcctgctagccccacctgtaataatggcacactggagtgc
ggtgtgtgtcggtgtgactcaggacgcctagggccacattgcgaatgcaccgaggccgac
ttcaatcccaacgacacagacagctgtaaaccctcccctggtgcagctatctgcaatgga
cgaggcgactgcgtgtgcggccaatgtagctgtcactcaagagactttgggaaggtgtgg
ggcaaatactgtgagtgtgacgacttcagctgcatccgatccaaagggcaactttgttct
ggtcatggtgattgtgtatgtgggttctgtcagtgctatcctggctggtcaggcgagagc
tgtaattgttccacaaggacggacacttgcatggccagcattgatctgctgtgtagcggc
cgtggtgagtgtttgtgcggtgtgtgttcatgcagcctgcctggagcatacggtgccacc
tgtgagaaatgtcccacctgccccgactcctgcaccttgaaaaaggactgtgtggagtgt
aagcactataagagaggaccactgtttgagaagaaaagctgcaacactgcaatctgcaga
gatgaaatccagttggtggatgagctagccttccatgagaagagcgcgttgaactgcagc
tacaaagatgaggatgactgcattcatcacttccagtactatgaagacatcagtggaaaa
tccattctctacctcgttaaagaacccgagtgtcctaaaggtcctgatattctggtagtg
gtgggttctgtcattggctccatcttcttgctgggcttggctgctctgctggtttggaag
ctgctggtcagtattcatgaccgccgagaatttgccaagtttgaggaagaaagagctaag
gccaagtgggaagcgggtaataacccattgtataaaggagctacaactacttttacaaac
gtgacgtacagtggcaactcctaa
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