Ictalurus punctatus (channel catfish): 108279646
Help
Entry
108279646 CDS
T04658
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108279646
03037 Cilium and associated proteins [BR:
ipu03037
]
108279646
Transporters [BR:
ipu02000
]
Other transporters
Pores ion channels [TC:
1
]
108279646
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108279646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108279646
NCBI-ProteinID:
XP_017349464
Ensembl:
ENSIPUG00000024221
UniProt:
W5UIG0
LinkDB
All DBs
Position
19:25234189..25261563
Genome browser
AA seq
216 aa
AA seq
DB search
MLPASEAAKIYQTNYVRNSRAIGVLWAIFTVLFAIVNVVCFIQPYWIGDGAETPQVGYFG
LFHYCIGNGVARELACYGTFSDFGSIPSGAFKAASFFVGTSMVLVLTCIGCFTLFFFCST
ATVFKICGWMQLAAGTCLVLGCLIYPDGWDAEQVKRMCGEQTDKYTIGECSVRWAYILAI
MGIMDALILSFLAFVLGNRQDGLMGDELLGDKSGNA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgcatcagaagccgccaagatctaccagacgaactacgtgcggaactcgcgc
gccatcggcgtgctgtgggccatcttcaccgtgctgttcgccatcgtcaacgtggtgtgc
ttcatccagccctactggatcggcgacggcgcggagaccccgcaggtcggctacttcggc
ctcttccactactgcatcggtaacggcgtggcgcgcgagctggcctgctacggcaccttc
tccgacttcggctccatcccgtcaggagccttcaaggccgcgtcgttcttcgtgggcacc
tccatggtgctggtgctcacctgcatcggctgcttcacgctcttcttcttctgcagcacc
gccaccgtcttcaagatctgcggctggatgcagctcgcggcaggtacatgcctggttctc
ggctgtctcatctaccctgacggctgggatgcggagcaggtgaagcggatgtgcggagag
cagacggataagtacacgatcggagagtgctcggtgcgctgggcctacatcctggccatc
atgggcatcatggacgccctcatcctctccttcctcgccttcgtgctgggaaaccggcag
gacggcctcatgggagacgagctgctgggagacaaaagtggaaatgcatag
DBGET
integrated database retrieval system
