Ictalurus punctatus (channel catfish): 108279695
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Entry
108279695 CDS
T04658
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108279695
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108279695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
108279695
NCBI-ProteinID:
XP_017349560
Ensembl:
ENSIPUG00000008622
UniProt:
A0A2D0T4M3
LinkDB
All DBs
Position
19:11807381..11990939
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AA seq
546 aa
AA seq
DB search
MLEHSSERGFVPSVCVDGMRYSSTTNNPVTMRTSEELLLSNGTAGKMNGALEHSDQPDPD
AIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALE
AQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSSFGQI
EECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKEQ
RRLQQQLAQQMQQLNSASAWGSLTGLTGLTPQYLAVRGHTHSATPISTTLLQQATSSSNL
GAFSGIQQMAGMNALQLQNLATLAAAAAAAQSSASPSTASALTSSTGSLGALASPAAGST
ANSSAGAMGSLGSLGTLQGLAGATVGLNNINALAGSVNIAHMLSGVAALNGGGSAGPMDA
LTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQM
FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK
NDSKPY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcactcgtctgaacgaggctttgtgcctagtgtgtgtgtggatggtatgcgc
tactcctccaccaccaacaaccccgtcaccatgaggactagtgaggagctgctgctaagt
aacggcacagctgggaagatgaacggagctctggagcattcggatcaacccgatccagac
gcgattaagatgttcgtgggtcagatccctcgctcctggtctgagaaggagctgaaggag
ctgtttgaaccgtacggggccgtctatcagattaacatcctgagagaccgcagtcaaaac
ccaccacagagcaaaggatgctgttttgtcacattctacacacggaaagccgctcttgag
gcccagaacgccctgcacaacatcaaaaccttaactgggatgcaccatcctattcagatg
aagcctgcagacagtgagaagtcaaatgcggtggaggacaggaagttgtttatcggcatg
gtgtcaaagaagtgtaacgagaatgatatccgggtcatgttctcttcctttggtcagatt
gaggagtgtcgcatcctgagagggccagacggacttagccgaggatgtgcgtttgtcacg
ttttctaccagggctatggcacagaatgcaatcaaagccatgcatcagtctcagaccatg
gagggatgctcctcccccatggtggtgaagttcgccgacactcagaaggataaggagcag
cggcggctgcagcagcagttagcccagcagatgcagcagctgaacagcgcctctgcctgg
ggcagtttgaccggcctgaccggcctcaccccgcagtacctggcagtaagaggccacacc
cactcggccacgcccatcagcaccacattgctacagcaggcgacctcgtccagtaatcta
ggagcgttcagtgggatccagcagatggcaggtatgaacgctctgcagttacagaatctg
gccactctagcagcggccgccgcggcagctcagagctcggccagcccgtccaccgctagt
gccctgacctccagcacaggctccctgggagccctggccagcccagcagcaggttccaca
gctaactcgagtgccggagcaatgggttctctcggctctttgggaaccctgcaaggcctc
gctggggccacagtgggcctcaacaacattaatgcactagcaggtagcgtcaacattgct
cacatgctctcaggtgtggctgccctgaatggcggcggctcggccggccccatggatgcc
ctcactcaggcttactcaggaatccagcagtatgccgccgccgccctgcccacactctac
agccagagcttacttcagcagcagagcgccgcagggagccagaaagagggaccagaaggg
gcaaaccttttcatctatcacctgccgcaggagttcggggaccaggacattctgcagatg
ttcatgccttttggaaatgtagtgtcggccaaagtgttcatcgacaaacagaccaatctt
agcaagtgcttcggtttcgtcagttacgacaatcccgtgtcggcacaagcagccattcag
gcaatgaacgggtttcagatcggaatgaagcgcctcaaggtgcagctgaagcgctctaag
aacgacagcaaaccctactga
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