Ictalurus punctatus (channel catfish): 108279720
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Entry
108279720 CDS
T04658
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108279720
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
108279720
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
PH_20
RHG20_PH
FYVE_2
Motif
Other DBs
NCBI-GeneID:
108279720
NCBI-ProteinID:
XP_017349621
Ensembl:
ENSIPUG00000007282
UniProt:
A0A2D0T473
LinkDB
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Position
19:10239717..10290152
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AA seq
1239 aa
AA seq
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MSTGMKKPPVAPKPRLLASQKPAPPPIAPKPEILLPSPSPSAPKRGKPALAPKPCLDKIS
PKAVQSSLSIGTGKSEGVPASKNGGLSHYIIPPKSHHMGNCKTRGSEETIETTEYDVEKK
RGSPVEEPGRNSAKDRVTLLTQDVQNHIPAHSPNTLPDAKDDAHAAVLVKDHIHTQPELH
TATDETFLKREQLPEQTSHSHCLTTADTHTNVSVPSPPSKPLPVPQPRRPRRNVLLRQKV
AVEYPAETETRPPATLQTQVTHSEDRHSSPEVPEDASSSSSSLANTSPDSHTGSAHITDP
THNRDSTCNTHNGGSVTHPETACYSEPATSETSVSIEEEEQQPPAPPPRQKSLLQNDNHG
YKTSSSLDNLLLTEHADSERFDEKLDEEEEEDDEDEDGAYGDFARCPFTRSLPKQIRLNR
SPRAAPVTKTSSAEESSPKIVPKKPQRHSLPASALSRKQNTSPQTPAPAPAPVFGALPAP
PNEKPSSWRITFSGIPLFGKQLSQSANQSQTSDGKRLGSVLVKQRARSFSSADLLRVDSG
VGVQKHRSLKKLLEVRVKLFPKLMRGGTSLDSASTGTECDAHIEDTPTGEEVAQHDGEGD
CGVEYENVPLYEEIPEYMNLPWVYSTQNTDSGVYEAQEPYESSRPHLSGDLSEEEEGLSS
NEEDDNSSTSSKDEMDQSRDKEEVEKAKRNKVVHIAMEIMSSEKVFVDVLKLLHIDFRDA
VAKATRASGKPVVEERVLNQILYYLPQLYELNKDLLRELEERVAHWSDHQRLADIFVQKG
PYLKMYSTYIREFDRNVALLDEQCRKNPSFAAVVRQFETSPRCASLALKHYLLKPVQRIP
QYRLLLTDYLKNLPEDSSDYKDTQTALGVVKEVANHANDIMKQGDNFQKLMQVQCSLNGH
HEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLFNDILLYTTPVQSGQYKVNSMLSLAGMKV
SKPSQEAYQNELNIESVERSFILSASSATERDEWLEAIATAIDDYTRKKISFISSRSQES
EEVPTDGSPLGSKAPIWIPDLRTTMCMICTCEFTLTWRRHHCRACGKVVCQACSSNKYYL
EYLKNQLARVCDQCYVKLQQKDKGEQSEVAVSPSGRSSAFSFSRKQKKIPAALKEVSANT
ENSSMSGYLQRSKGYKKPWKRLWFVIKNKVLYTYAASEDVAALESQPLLGFFLREEKSGP
AEKLQFKLYHKNILYYIFRADDIPAAQRWIEAFQEAMIL
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggtatgaagaagccgccggtcgcccccaaacccagactgttggcatctcag
aagccagccccgcctccaatcgcacctaaaccggagatccttcttccctctccatctccg
tctgcgccaaaacgggggaagcctgctctagcccctaaaccatgcctggacaaaatcagc
cccaaagctgtgcagtcatccctctctatcggcaccggcaaatctgagggcgtccccgcg
tccaaaaacgggggcctctcgcattacatcataccgcccaagtcacaccatatgggcaac
tgcaaaacgaggggatctgaggagacgatcgaaacaaccgaatatgacgtagaaaaaaag
cgaggcagtccagtagaagagcccggccgcaacagcgcaaaggaccgagtgactttactc
acacaagatgtgcaaaaccacattcccgcacactccccaaacactcttccagatgcaaag
gacgatgcacatgcagctgtgctcgtcaaggatcacatacacacacaaccagagttgcac
accgcaacagatgaaactttcctgaaacgagaacaacttcccgagcagacttcacactcg
cactgtttaaccactgctgacacacataccaatgtttctgtgccttcaccccctagtaag
ccacttcctgtgcctcagcctcgccgtccacgaagaaatgtgcttctccggcagaaggtg
gcggtggagtatccagccgaaacggagacacgcccccccgcgacccttcaaacacaggtg
acgcactcagaggaccgacattcttcaccggaagttccagaggacgcttcatcatccagc
agttctcttgcgaacacttctccagactcgcatacaggctccgcccacattacagacccc
acccacaacagagactctacctgtaatacacacaacggtggtagtgtgacccacccagag
accgcctgctattccgaaccagccactagtgaaacatccgtttccatagaggaggaggag
caacagccaccagccccgccccctcgacaaaagtccctcctacaaaacgacaatcacggt
tacaaaacctcatcttccctggataatctgcttcttacggagcatgcagactctgagaga
tttgatgagaagcttgacgaggaagaggaggaggacgacgaagatgaagacggcgcatac
ggcgattttgctcgttgtccattcaccaggagtttacccaaacaaattcgactcaaccgc
agccctcgggcggcacctgtaaccaagacgtcttcggccgaggagagctcgccgaagatc
gttcccaagaagccgcagagacacagtctacctgcatctgcactgtcgaggaagcagaac
acgtcaccgcaaacacccgctccagccccggcccctgttttcggagcccttcccgcccct
cccaacgagaaaccctcctcatggcgcatcactttctcaggaatccctctttttggtaag
cagctatctcaaagtgctaaccaatcgcaaaccagcgatggaaagaggctggggtcagtg
ctggtcaagcagagagcgaggtcgttctcctcggccgatctccttcgtgtggactcgggc
gtcggtgtacagaaacaccgcagcctgaagaaacttctcgaagtgcgcgtcaagctgttt
ccgaagctgatgcgtggtggcacgtctctggactccgctagcacgggtacagagtgtgac
gcgcacattgaggacacgcccaccggtgaggaggtcgctcagcatgacggagaaggtgat
tgcggagtagaatatgaaaatgttcccctctatgaggagatccccgagtacatgaacctg
ccctgggtctactccactcagaatacggatagcggagtgtatgaagcgcaggaaccgtat
gaatcgagcaggcctcatttgtccggtgacctatcggaggaagaggaggggctaagctcg
aacgaggaggacgacaacagctccacctccagcaaggatgaaatggaccagtcaagagac
aaagaggaggtcgagaaagcaaaaaggaataaagtggttcacattgccatggagatcatg
agctccgagaaagtatttgtggatgttctgaagttgctgcacattgacttccgggatgcg
gttgccaaagcgacccgtgccagtgggaagcctgtggtggaggagcgggtgctgaatcag
atcctgtattacctgcctcagctctacgagctcaacaaggacctgctgagagagctggag
gagagagtcgctcactggtcggatcaccagaggctggccgacatcttcgtgcagaaggga
ccgtatctgaagatgtactctacatacatccgagagttcgatcgcaacgtggctctgttg
gacgaacagtgtcgcaagaacccttctttcgcagcagtcgttcgtcagtttgagacgagt
cctcgttgtgccagtctggcgttaaagcattacctactgaaaccggtgcagcggattcca
cagtaccgactcctgctgacagattatttgaaaaatcttcctgaagactcgtccgactac
aaggacacacaaactgcccttggggtggtgaaggaagttgcgaatcacgccaatgacatc
atgaaacaaggggacaatttccagaagttaatgcaggttcagtgcagtttgaacggccat
catgaaattgtgcagcctggaagggtatttcttaaggagggcacgctgatgaaactatcc
aggaaagtaatgcagcccagaatgttcttcctgtttaatgacatcctgctgtacaccact
cctgtacaatctggccagtataaagtaaacagcatgctgtctctggctggtatgaaggta
agcaagcccagtcaggaggcctatcaaaacgaactgaacattgagagcgtggaacggtct
ttcatcctgtccgctagctcagccacggagagagacgagtggctagaagccatcgccacg
gcaatagacgactacacaaggaagaagatctcatttatctccagccgtagccaagagtct
gaggaagtacccactgatggttctccactgggttctaaagctcctatctggatcccagac
ctccgcaccaccatgtgtatgatctgtacctgcgagttcaccctcacctggagacgccac
cactgccgggcctgcggcaaggttgtgtgccaggcgtgttcgtcgaataaatattatctg
gagtacctgaagaatcagctggcgcgagtgtgtgatcagtgttatgtcaaactacagcag
aaagataaaggcgagcagtccgaggtggccgtttcacccagcggccgcagctcggcgttc
tccttctctagaaaacaaaagaagattcccgcggctctgaaagaggtttctgcgaacact
gagaattcctctatgagcggttatctccagcgatccaaaggctacaagaaaccgtggaag
cggctgtggttcgtcatcaagaacaaagtcctttacacatacgctgctagcgaggatgtc
gcggcgctggagagtcagccgctgctgggctttttcctgagggaagagaagtccggaccg
gcagagaagctgcagtttaaactctatcacaagaacatactgtattatatcttcagagcg
gacgatatccctgcagctcagaggtggatcgaggcgtttcaggaggccatgattctttga
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