Ictalurus punctatus (channel catfish): 108279753
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Entry
108279753 CDS
T04658
Symbol
erc1b
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X2
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279753 (erc1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Others
Others
108279753 (erc1b)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108279753 (erc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Tropomyosin
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
108279753
NCBI-ProteinID:
XP_017349679
Ensembl:
ENSIPUG00000023199
UniProt:
A0A2D0T452
LinkDB
All DBs
Position
19:complement(23036368..23248953)
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AA seq
1110 aa
AA seq
DB search
MYGSARSVGKPEANQSPGRSPRLPRSPRLGHRRNNSTGGAGGKTLSMENIQSLNAAYATS
GPTYLSDNDAPTPASVSDMPKSTMTLGRSGARLPYGTRATVAGSSPNIASDSIAFGDHHV
PAAMASTVPHSLRQARDNTIMDLQAQLKEVLRENELLRKEVDVKESKLSSSMNSIKTFWS
PELKKERALRKDEVSKMAVWKEQFRVMQEETQHLQMTIQALQDELRIQRDLNQLFQQDYS
GARPGEPFSTELTEENFHRLHGEHERQAKELFLLRKTLEEMELRIDTQKQTLNARDESIK
KLLEMLQSKGLSGKASEEEHERTRRLAEAEMHIHHLESLLEQRDKETSALREELHRRYEG
APDSAKTKALQTVIEMKDSKINSLECSLRDLEEEVQMLKSNGALSTEEREEEMKQMEVYR
SHSKFMKNKVEQLKVELSQSEAQAEELRKRTAELQRELSAIDQVKQDLSRKDTELLGLQT
KLETLNNQFSDSKQHIDVLKESLTAKEQRAAILQTEVDALRLRLEEKEAMLNKKSKQIQE
MSEEKGTLNGEIHDLKDMLDVKERKVTVLQKKIENLQEQLKDKEKQLSSLKERVKSLQAD
TSNTDTALTTLEEALAEKERIIERLKEQRDRDEREKGEELDTCKKELKELKEKINLLQGD
LSDRETSLLDLKEHASSLASSGLKKDSKLKSLEIALEQKKEECIKLESQLKKAHTAAAEA
QANTELSERISTLEQEVNRHREDAGKAQAEVDRLLEILREMENEKNDKDRKISELERQMK
DQSKKVATLKHKEQVEKNRNAQLMEEARKREDNINESSQQIKDSLKLKDERIEELEEALR
ESVQITAEREMVLAQEEAARTHAEKQMEELLGAMEKVKQELESMKAKLSSTQQSLAEKEA
HLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVSLLKREKD
RLVQQLKQQTQNRMKLMADNYEDDHLKASSNSDQSNHKPSPDQIIPPLIDLNQNRSKLKL
YIGHLTALCHERDPHILQDLAPPSAYHRSQRDAWEEELQKMSMEELESELEQCERESAEL
QEYANSVLQQIADHCPDILEQVVNALEESC
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagcgcccgctcagtgggtaaaccggaggccaatcagagccccggacgctct
ccacgcctgcctcgctctccacgcctgggccaccggcgcaataacagcacaggtggtgct
gggggtaaaacgctctccatggagaacatccagtctctgaacgccgcctacgctacatcc
ggccccacgtacctgagcgacaatgacgcgcccacccccgcctccgtctcggacatgcca
aagagcacgatgaccctgggccgctcgggcgcccggcttccctacggcacgcgcgccaca
gtggcgggcagcagtcccaacatcgccagcgactccatcgccttcggagatcaccacgtg
cctgcagccatggcgtccaccgtaccgcactcgctgcgccaggcccgcgacaacaccatc
atggacctgcaggcgcagctgaaagaagttctgcgtgagaacgagctcctgcgcaaggag
gtggacgtcaaggagagcaagctcagctcgtccatgaactccatcaagaccttctggagc
cccgagttgaagaaggagcgcgccctgcgtaaggacgaggtctccaagatggccgtgtgg
aaggagcagttccgcgtgatgcaggaggaaacgcagcacctccagatgaccatccaggct
ctccaggacgagctgcgcatccagcgcgaccttaaccagctgttccagcaggactacagc
ggggcacggccaggggaacccttctccaccgagctcaccgaggagaacttccaccggctg
cacggcgagcacgaaagacaagccaaagagctgtttctcctgaggaagaccctggaggag
atggagctgcgcatcgacacgcagaaacagaccctcaacgcccgggacgagtctatcaag
aagctgctggagatgctgcaaagcaaaggcctgtcgggtaaagccagcgaggaggagcac
gagcgcacgcggcgcctcgccgaggccgagatgcacatccaccatctggagagcctgctg
gagcagagggacaaggagacgagcgcactcagggaggagctccaccgacgctatgaggga
gcgcctgattctgccaagaccaaagccctgcagaccgtcatcgagatgaaggactctaag
atcaattctctagagtgcagtctgagggatctggaggaggaggtgcagatgctgaagtcc
aacggcgctctgagcacagaggagcgggaggaggagatgaagcagatggaggtctatcgc
agtcactccaagttcatgaagaataaggtagagcagctgaaggtggagctgtctcagagc
gaggcccaggccgaggaactgagaaagcgaacggctgagctgcagcgggagctctctgca
attgaccaggtgaagcaggacctctccaggaaggacacggagctactgggcctccagacc
aaactcgagacgctcaacaatcagttctcagacagcaagcagcacatcgacgtccttaaa
gagtctctaaccgccaaagaacagcgagctgccattctgcagacggaggtggatgcccta
cgcctgcgcctggaggaaaaggaagccatgctgaataagaagtcgaagcagatccaggag
atgtctgaggagaaaggcacactcaacggagaaatacacgaccttaaagacatgctggac
gttaaagagcgcaaagtcaccgtgctccagaaaaagatcgagaacctgcaggagcagctg
aaggataaggagaagcagctgagtagtctgaaagagagggtcaaatccctgcaggctgac
acctccaacacagatacagctctcactacgctcgaagaggcgctggctgagaaggagcga
attatcgagcgtctgaaagagcagagagatcgagatgagagggagaagggagaagagctg
gatacctgcaagaaagagcttaaggagctgaaggagaaaatcaacctgctgcagggagac
ctgtccgaccgtgagacatctttgttggatctgaaggagcacgcctcatcactggcctcc
tcgggtttgaagaaggactccaagctcaagagcctggagattgcgcttgagcagaagaaa
gaggagtgtatcaaactggagagtcagctcaagaaggctcacacggcggctgcagaggct
caggcgaacacggagctgtcagagcgcatcagcaccctcgagcaggaggtgaaccgccac
agagaggatgctgggaaagcccaggctgaagtggaccgtctgctggagatcctcagagag
atggagaacgagaagaacgacaaagaccgcaagatcagtgaactggagaggcagatgaag
gaccagagcaagaaggtagccactctgaaacacaaggagcaagtggagaagaaccggaat
gcacagctgatggaggaggctcgcaagcgggaggataacatcaacgaaagctctcagcag
atcaaggactctctgaagctgaaagacgagcgaatcgaggaactggaagaggcgctgcgt
gagagtgttcagatcactgcagagagagagatggtgctggcgcaagaagaggctgcacgc
acgcatgcagagaaacagatggaggagctgctaggagcgatggagaaggtgaagcaggag
ctggagtccatgaaggccaagctttcgtccacgcagcagtccctggcggagaaggaggcc
cacctgaccacactgagagccgagcgcaggaagcacctggaggaggttctggagatgaag
caggaggcgctcctggcagccatcagcgagaaggacgccaacatcgccctcctggagctg
tcctcctctaaaaagaagaagactcaggatgaagtgtctctgctgaagagggagaaagac
cgactggtgcagcagctcaaacagcagacgcagaaccggatgaaactgatggccgacaat
tacgaggatgaccatctgaaggcttcttcgaattcagaccagagtaatcacaaaccctct
ccagatcagattattccccctctcatagacctcaatcagaaccgcagtaagctgaaattg
tacattggccacctcacagccctttgtcatgagagagacccccacatcctgcaggacctg
gctccaccctcagcttaccaccgcagccagagggacgcctgggaggaggagctacagaag
atgagcatggaggagctggaatcggagctggagcagtgtgagcgagagagcgccgagctg
caggagtacgccaactcggtcctgcagcagatcgcagaccactgccccgacatcctggag
caggtcgttaacgcactggaggagtcgtgctga
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integrated database retrieval system
