Ictalurus punctatus (channel catfish): 108279758
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Entry
108279758 CDS
T04658
Name
(RefSeq) DNA helicase B
KO
K15254
DNA helicase B [EC:
5.6.2.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108279758
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108279758
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108279758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
NR_Repeat
AAA_11
UvrD_C_2
ABC_tran
CbiA
nSTAND3
KAP_NTPase
ParA
NB-ARC
AAA_12
AAA_31
SH3_13
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108279758
NCBI-ProteinID:
XP_053544097
Ensembl:
ENSIPUG00000016651
UniProt:
A0A9F7TS20
LinkDB
All DBs
Position
19:17968834..17987802
Genome browser
AA seq
1311 aa
AA seq
DB search
MEKRLSYNNMSASKYVKLVGYILPPKTDNAAEESENDEGEEEPVPEFLDMKEMASVFSGG
FMSQQSVPAADEVDFMFHGKKVRVKGRFPLRNPWWEISCGAQQHSRKLVVDGYPSYKLHT
DLKNGWRTFVSLFLKECDVEPNFVTRFMQWLPEDRYVDLINVVEALHEFGENIKDTREEA
DYAKSNIWKSDAGFLVRAATIYPYIMKYLPTLLPGQFLNLLKKGKEEEEKQQSKIDEGNR
EGSPQKNNTSPLARLEELIKTDVWKFGFGYVSKTGYWRDTNQSSMQKRPRSAFLRVCSAA
LYRSVSSRLKRSTDWLYMSWEKHMLALILPGCFCYIFSQMFCSFNSFCFASCPVDFMFHG
KKVRVKGRFPLRNPWWEISCGAQQHSRKLVVDGYPSYKLHTDLKNGWRTFVSLFLKECDV
EPNFVTRFMQWLPEDRYVDLINVVEALHEFGENIKDTREEADYAKSNIWKSDAGFLVRAA
TIYPYIMKYLPTLLPGQFLNLLKKGKEEEEKQQSKIDEGNREGSPQKNNTSPLARLEELI
KTDVWKFGFGYIMYKEFRLVRCETTLKDFMSCELFSKMSSEQQNALKVYHELKGYCSQFG
HTYIDRTVLEEKMKMQEERIWEAVAFLRKHGVVIIEKQKIALRNLYKYEKEIAECLQQLI
EGEPWKIDLDVRKVLLSAAHDLRESASGVHGPMDEEPEATSIKLDPDQVRAAEMMCANAV
TVVSGKGGCGKTTVVSMIFKAAMKQQEKIREDDHDSTREEGEKKENSKEPLEVLLTAPTG
RAASLLTKKTCFTAYTMHQVLWSYMLTKKQPSGEPINWKFANVRVLVVDEGSLVCVQILS
SILSMLTKHAQLQKFIILGDIRQLPSIQPGNVLNDLFTSLKKVNWAIEMCTNHRAESELI
VQNAGLIADMGVTKKFHNLNYDATVELGKKRTLPSPDKRFIEILLPEKENDDDLQNSIKC
LLRGPAPGLVDHESSQFVAFKRTECALINELCCKHYCNHNTKTHKNKMNFQIGDKVCCTR
NGYVTDIDKKDEAKDQEDEMDGSKSKKERLCNGEIFFITQDVTVKEDTARKCVKLRYLTL
DNKQGEKLTVEYRELMRQCKLRHAWARTIHTFQGSEEKTIVYVLDSGIPQTWKHVYTAVT
RGQSRVYVLAKKDGLENAIRRHVIKRNTRLEGHVVNLLHELGLADKDFLSQASQSQFNSP
KRGYGFQTTQSTHESLSSPGPSQAYPGMRNLKNVTCQNLTDTGSMFGDLSFPKSASPSPC
KRERTTDNCTMPSKQMKVDTPLGCSKLKSLSLNSITPRQLYPKAPQSHQDQ
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagattaagttataataatatgagcgccagtaaatacgtgaagttggtgggt
tacattttgccaccaaagacggataacgcggctgaagagtccgaaaacgacgaaggagag
gaagagccagtgccggagtttctggacatgaaggaaatggcctctgtcttttctggggga
ttcatgtctcagcagtctgtacccgcggcggatgaagtggatttcatgtttcatgggaag
aaagtacgtgttaagggccgatttcctctcaggaacccatggtgggagatctcctgcggt
gcccagcaacactcccgtaaactggtggtcgacggctacccttcctacaaactccataca
gacctgaaaaatggctggcgcactttcgtgtctctcttcctgaaggagtgtgatgtggaa
cctaattttgtcacccggttcatgcaatggctaccagaggacagatatgtggacctcata
aacgtagtggaagctctgcacgaatttggagagaatatcaaagacacaagggaagaagct
gattatgccaagtctaacatttggaaatcagatgcaggttttcttgtaagagctgccacc
atctatccttatatcatgaaatacttgccaacgttgctgccagggcagtttttaaatcta
ctgaaaaaagggaaagaggaagaggagaaacagcagtctaaaattgatgaaggaaacagg
gaaggttccccacagaaaaataatacgagtcccttagccagactggaagagctcatcaag
actgatgtgtggaagtttggctttggctatgtgagtaagactggatattggagagacact
aaccagtcaagtatgcagaaaaggccacgtagtgctttcctccgagtgtgttctgctgcc
ttgtaccgcagcgtgagcagccgtttgaaaagaagcactgactggctttacatgtcttgg
gagaagcacatgctagctctcatccttcctggatgtttttgctatattttttcccaaatg
ttctgtagttttaactctttctgctttgcttcatgtccagtggatttcatgtttcatggg
aagaaagtacgtgttaagggccgatttcctctcaggaacccatggtgggagatctcctgc
ggtgcccagcaacactcccgtaaactggtggtcgacggctacccttcctacaaactccat
acagacctgaaaaatggctggcgcactttcgtgtctctcttcctgaaggagtgtgatgtg
gaacctaattttgtcacccggttcatgcaatggctaccagaggacagatatgtggacctc
ataaacgtagtggaagctctgcacgaatttggagagaatatcaaagacacaagggaagaa
gctgattatgccaagtctaacatttggaaatcagatgcaggttttcttgtaagagctgcc
accatctatccttatatcatgaaatacttgccaacgttgctgccagggcagtttttaaat
ctactgaaaaaagggaaagaggaagaggagaaacagcagtctaaaattgatgaaggaaac
agggaaggttccccacagaaaaataatacgagtcccttagccagactggaagagctcatc
aagactgatgtgtggaagtttggctttggctatataatgtataaagagttccgattagtc
agatgtgagactacactgaaggactttatgtcctgtgagttattcagcaaaatgtcttct
gagcagcaaaatgccctgaaggtgtaccacgaacttaaaggctactgtagtcagtttggc
cacacctacattgaccggacggttctggaggagaagatgaaaatgcaagaagaacgcatt
tgggaagccgtggccttccttcgcaagcatggagtggtgatcatagaaaagcagaagatt
gccctgaggaatctctacaagtatgagaaagaaattgctgaatgtctccagcaactaata
gagggggaaccctggaagattgatctggacgtgaggaaggttctcctctccgcagcgcat
gatctaagagagtctgcctcaggtgtgcatggccccatggatgaagaacctgaggccacc
tctataaagctggacccagaccaagtgcgagcagcagagatgatgtgtgccaatgctgtg
acagtggtcagtggaaaggggggctgtggcaagaccaccgtggtcagtatgatctttaaa
gctgccatgaagcaacaggagaagattagagaggatgatcatgacagcaccagggaggag
ggtgagaagaaagagaatagcaaagagccactggaggttcttcttactgctcccacaggt
agagctgcatcacttctgaccaagaaaacctgcttcacagcttataccatgcatcaggtc
ttatggagttacatgcttacgaaaaaacaaccaagtggggagccaataaactggaagttt
gccaacgtccgagtgctggtggtggatgaaggcagtcttgtgtgtgtgcagatcctttcc
tccatcctgtcaatgctcaccaaacatgcacaactacaaaagttcataattctgggagat
ataaggcagctgcccagcattcaaccaggaaatgtcctcaatgacctctttaccagtcta
aagaaggtgaactgggccatcgaaatgtgcaccaaccaccgtgctgaatcagagctcatt
gtccaaaatgctggattaatagcagatatgggtgttactaaaaagtttcataatctaaac
tatgatgctactgtagaactgggtaaaaaacgcacactaccctcacctgacaagaggttc
attgagatccttcttccagaaaaggaaaacgatgatgatctacagaattctataaagtgt
ttgctgagaggcccagcaccagggctggtggatcatgagtcttcacaatttgttgccttc
aagaggactgaatgtgctctgattaatgagctttgctgcaagcattactgtaaccacaac
accaagactcataaaaacaaaatgaactttcagattggcgataaagtatgttgcacaagg
aatggctatgtaactgatatagacaaaaaagatgaagccaaagaccaggaggacgaaatg
gatggaagcaaaagtaaaaaagaacgcttgtgcaatggggagattttctttattacacag
gatgtgacggtaaaggaagacactgcacggaagtgcgttaaattgagatacctgactcta
gataacaagcagggagaaaagctgactgttgaatacagggagctaatgagacagtgtaaa
ctacgacatgcctgggctcgaaccattcacacctttcagggctcagaggaaaagactatt
gtgtatgttcttgacagtggcatccctcaaacttggaaacacgtttatactgcagtcaca
cgaggtcagagccgagtgtatgtcttagcaaagaaggatgggcttgagaacgccatccga
agacacgtcatcaaacgcaacacacgactagaaggccatgttgtgaacttgttacatgaa
ttaggattagccgataaagattttctcagtcaggcaagtcagtctcaattcaactcgcca
aagcgaggttatggatttcagactactcagtctacacacgagtcattgtcaagcccaggt
ccatcccaagcttaccctggaatgaggaatttgaagaatgtgacctgtcaaaacctcact
gatactggtagtatgtttggtgacctcagtttccccaaatcagcaagtccaagtccatgt
aagcgagaaagaaccacggacaactgcaccatgccatccaaacaaatgaaggtggacaca
ccactgggctgctccaagctaaagtccctgtctcttaacagcatcactcccagacagctc
tacccaaaagctccacagtcgcaccaggaccagtga
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integrated database retrieval system
