Ictalurus punctatus (channel catfish): 108279766
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Entry
108279766 CDS
T04658
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108279766
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108279766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
DSE1_N
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108279766
NCBI-ProteinID:
XP_017349715
Ensembl:
ENSIPUG00000002009
UniProt:
A0A2D0T495
LinkDB
All DBs
Position
2:complement(11343947..11386348)
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AA seq
851 aa
AA seq
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MCCETSLMGVPCKNDTDDLNKQNNHMDTGTGGDTLGTKVLQDSNIKSNTLEEMYEGQTAA
SSQGPSDTEQEVLPPQNKPQKKRGRPRKTVNNQDSDPTKMKSAPSEVPVNHDSSAIPESP
EMTPSGRPKRKAAKVALEYLHNISKDLEKFEKSFTKREQNGLGRSSSPSQKKPSGKARGK
KRKAADDDSDLNDDADFDPGDHREVESEEDEDDDYEDSESCKQHYKNLPSNHKVVGNNGL
SSSAMQPIWKSFRNTKEFRDKHSSSWVFPEWIPSVSDWHLLSFREAEKYLPQEKESMSFT
LDREGIKEQGTLQKVKRFESMSPNAERWDSLFFVGGPVWAMEWCPVPEGAAHTQYAALYC
NRNMDDRHKINTLHTEHALLQLWDLGKLQMSRPLSSPRLAYALAVDDGCIWNLKWCPAGA
WEVPTTVRKAPHVPRLGLIAAAFSNGNIGVYSLPHPEHLQAQNQATGESSQAPQIYQVQR
IMTLQVGASQADHKGRSGLCFALDWLPLKPHNILAAGFCDGMVALWDLNTKSSLLRVRSP
DRSISLYPYHCFLAHENTIRCLSWCRASSELMVTVGDDRMIKLWNLTKTCTPLKAIKRFL
HTDVSWPIFWPGVFLTQESCYATLGQQGLHYFDSGYFGYKPLFVCSRKATVWSFSVSDWM
NSCVIGDNIGEFVCSVLCDPNCNYSNSKRHRFPVYRTELVQFEPGQRTEEEKEEEHDSTQ
QEPQTYIGAIRKYYLRFHDMDLRSFIKYQQKPILKQLHASETKGLLSVDQMPLNALYKVC
FNPNMDAHSWVLSAGQSGLVRVHCVSGLDGPVMHKLIHEAQAQFSTMFCSQEKDTSATTV
HQCMAETVQVP
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtgaaacctcgttaatgggggttccctgcaaaaacgacacggacgatctgaat
aaacagaataaccacatggacactggaactggtggtgatacactggggaccaaagtgctt
caagactctaatattaaaagtaacacacttgaagagatgtacgaaggacagacagcagcc
agctctcagggtccctctgatactgaacaagaggttttaccaccacagaacaagccacag
aaaaaaaggggacgtccaagaaaaacagtaaacaaccaagacagtgatccaacaaaaatg
aagtctgcccccagtgaagtacctgttaatcacgacagctctgccattccagaaagccct
gagatgactccaagtggacgcccgaagagaaaagctgccaaagttgctctggagtacctt
cacaatatcagcaaagaccttgaaaagtttgaaaaatccttcacaaagagagagcaaaat
ggactgggccggtcgagcagtccatctcagaaaaagccctcaggaaaagccagagggaag
aaaaggaaagctgcagatgatgacagcgatctgaacgacgatgccgactttgacccaggg
gaccacagagaggtggaaagtgaggaagatgaggatgacgattatgaagattcggagtca
tgtaaacaacactataaaaacttgccgtctaatcacaaggtggttggaaataatgggctt
tccagcagtgccatgcaacccatttggaaatcctttagaaacaccaaagaattccgtgat
aagcattcatcctcatgggtgtttcctgagtggattccttcagtcagtgactggcatcta
ttgtctttcagggaggcagaaaaatatttaccccaggagaaggagtcaatgagttttacg
ttagaccgcgagggaatcaaggaacagggtacgctgcagaaggtgaaaaggtttgaatcc
atgtcaccgaatgcagaaaggtgggactctctgttcttcgttggaggccccgtctgggcc
atggagtggtgtcctgtccctgaaggtgctgcacatacgcagtatgctgctctttactgt
aacagaaatatggatgaccggcacaaaattaacacacttcacacagaacatgctctcctc
caactatgggatctaggcaagctacagatgagtagacctttatcatccccgcgcttagcc
tatgccctggcagtggatgatggttgcatctggaacctgaagtggtgtcccgcaggagcc
tgggaggttcctacaacggtacgaaaggccccacatgtgcctcgattgggactgatagct
gctgccttttctaacggaaatattggtgtttacagtctgccacacccagagcatctacaa
gcccaaaatcaagctacaggagaaagcagccaggcaccacagatataccaggtgcagcgc
atcatgactctgcaggttggcgcaagccaggcagatcacaaaggccgaagtggactgtgt
tttgctctggactggctcccacttaaaccacacaacatcctggctgcaggtttctgtgat
ggtatggtggctttgtgggatctgaacaccaagtcttccttgcttagagttagatctccg
gacagatctatctctctctacccctaccactgcttcttggctcatgagaacaccattcgc
tgcctcagctggtgcagagcctcaagtgaattgatggtgacagtaggggatgatcgtatg
atcaaactgtggaacttgactaagacctgcactccccttaaggcaataaagcgcttcctg
cacactgatgtgtcctggcctatcttttggccaggagtttttctcacccaggagtcctgc
tatgccacgcttgggcagcaaggacttcactactttgactcaggttacttcggttataag
cctttatttgtttgttcaaggaaagctactgtatggagcttctctgtatccgactggatg
aactcctgtgtaatcggggacaacattggagagtttgtttgctctgtgctgtgtgaccca
aactgcaattacagcaacagcaagagacatcgatttccggtgtacaggacagagctggtg
cagtttgagcctggtcagagaactgaggaggagaaggaggaagagcatgactcaacccag
caggagccacagacctacataggcgccataagaaaatactacctccgcttccatgacatg
gaccttagatcttttataaaatatcagcagaagcctatattgaagcagctgcatgcgtcc
gagactaaaggcctgctttctgtcgatcagatgcctctgaatgcactctacaaagtgtgc
ttcaatccaaacatggacgctcactcctgggtgctgtcagctggccagtcggggctcgtg
cgtgttcactgtgttagtggcctggatggtcccgttatgcacaaactcattcacgaggcc
caagcacagtttagcaccatgttctgctctcaggaaaaagacacatccgctaccactgtc
caccagtgcatggcagagacagtgcaagtgccctag
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