Ictalurus punctatus (channel catfish): 108279801
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Entry
108279801 CDS
T04658
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108279801
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108279801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
108279801
NCBI-ProteinID:
XP_017349781
Ensembl:
ENSIPUG00000010442
UniProt:
W5UFI1
LinkDB
All DBs
Position
19:13787016..13795983
Genome browser
AA seq
1247 aa
AA seq
DB search
MDGEEGLSQKTDDVHLEHNSSVENDKRKEVKSTCLKIEGQDGYIFKSYSMTPHEIPLAKK
SPLASSSLQGTLNNLSSQVDEHLVDDPEAETCDKQDCSTSPAISDDIQTTEKDDLINDTS
VHIKEEPIETGESSQEDEKLFFDGPVGPFVTRSNDDDYDNLLSGYTSTLYDVAMDAVTQS
LLTSIRNPLNPRKKSPAWNHFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRR
AHPTVLLQDSDSPNTSFNSASSLIPPVKSPNNDLAASSKSHSNNHTSPSTSTAEAADVAS
KEASQKVKPKVEKSAKTDSGTAPSPHSINHHSDDAMDIGSDGSGSTPKSSNSRRRSAVWK
HFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRDIVIEENGQGSTIPPP
YTTPPTLLSHPQIQDPVEIKKEPTCTSSSPETMSDEVPMDDRENMDLKEELNDASYHSGQ
ECSLNMSFGLKSESMQLSSSPEDSAEVSSLAQEPSSVFQQNKKIMKRVKSEVWHHFIVSP
VDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKNQKSTSDKATLPQSLNSTL
AAEEDMSSNATDSPASEKKPHTQTIFSKKTSKLWNHFSLSSADPTKVVCLHCNRTISRGK
KTTNLGTSCLFRHMQRFHGHVLENNSNISGDASSGEIQVKQKPTDASTYEESSEKFDDCH
PAAKRITKLIAEMLALDLQPSAVVENVGLNRLLEYLQPQYSLPSSSYFTSTAIPEMYESV
KEVVLTHLKEAESGIIHFTTSIWVSSQTREYLTLTAHWVTFESHVRPQGQDFHCSALLGV
SPIDCDYNMLSIQKQLEYLWDTWIVSSGLKLGFMVTDNQAIGNVLEDNAHTLMNCFGHNI
DLIVNEAIKSQRMVQSLLSIARKICERVHRSAKAKEKLAELQKAYNLPENQLIQDVPSKW
KTSYFMLERLVEQKKAIDEMSLECNFRELISCDQWEVMQSVCNALKPFEVACREMSNRTA
TLGQVIPLIHILNRKIDMLFDETMGIDNMLKSLKEAMVTRMSPTLHDPRYTWATMLDPRY
KTSLFTEEEAEKCKQELIREVQRVSMSASAETKPPLSNGCSEDPAPSNSSTTNKDNLWAL
MDDIRQKIKQDDRPKSSELAVLEYLEEDILDQSCDPLDYWNLKLFLWPELAKVAVRYVGC
PPSIVPADTLFSTSSVNCALNQSRPLLENLERLLFLKVNLPLIYFQY
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaggaaggcctttctcaaaagactgatgatgtgcacttggaacataacagt
tctgtggaaaatgacaagagaaaagaggtcaaaagcacctgtttgaaaattgaggggcaa
gacggttatatctttaaatcatacagcatgacccctcatgagattccactggcaaaaaag
tctccacttgcgtcctcgtccctgcaggggacactcaataatctatcttctcaggttgat
gaacatttagtagatgatccagaggcagaaacctgcgataagcaggactgttcaacttct
ccagccatttcagatgatattcagactactgaaaaagacgatttgataaatgacacaagt
gtacatatcaaagaggaaccaattgaaacgggtgaaagttctcaggaggacgagaagtta
ttctttgatgggcccgtaggcccctttgttactagaagtaatgatgatgattatgataac
ctactgagtggctacacaagtactctttatgatgttgcaatggatgcggtcacacaaagc
cttctgacgtctattagaaaccctcttaatccaagaaaaaaatctcctgcatggaaccat
tttttcatatctcctcgcgatagtaccaaagctatctgtatgtattgtatgaaagagttc
agtcggggtaaaaatgagaaagacctcagcactagttgtttaatgaggcatgtgcgaagg
gctcaccctactgtacttttacaagacagtgactcgccaaatacttcatttaattctgcc
tcatctttaatacctcctgtcaaatcaccaaataatgatctggcagctagcagcaaatcc
cactcaaacaatcacacctcaccgtccacctctacagcagaagccgcagatgtagcatcc
aaagaggcatcccaaaaagtcaagccaaaagtggaaaagagtgccaagactgactctggt
acagccccatcccctcattccattaaccaccacagtgatgatgccatggacattgggtct
gacggctcagggtctacccccaagagctcaaattctcgaaggcgatcagctgtgtggaaa
cacttttatctgtctcctgctgatagctccaaagcagtgtgtattcactgtatgaatgag
ttcagtcggggtaaaaatgggaaagacttggggacaagttgtctaattcgccacatgtgg
cgggcccaccgagacattgtcattgaagaaaacggtcagggttcaacaattcctccacca
tatacaacaccgccaactctgttatcacacccgcagatacaggaccctgtagagataaaa
aaagaacccacttgtacctcctcatcccctgaaaccatgtccgatgaagtgcccatggat
gatcgtgaaaatatggatttaaaggaggagttaaacgatgcctcatatcattctggacaa
gagtgttcactgaacatgtcttttggtctaaaaagcgaaagtatgcagctgtcatcctcc
ccagaagattctgctgaagtctcaagcctagctcaagagccaagctcagttttccaacaa
aacaaaaagataatgaaaagagtgaaatccgaagtatggcaccacttcatcgtctcccca
gttgaccaactcaaggctttgtgtcggtactgtccatgtgtcattagtcgtggcaaacgt
ggagacttcggcacaagctgtttgatgcgccatctgatgagacggcatcctgatgtccta
aagaaccaaaaaagcacaagtgacaaagcgaccttacctcagtcactcaatagcaccctc
gctgcagaggaggacatgtcgtcaaatgcgactgacagccctgctagtgagaagaaaccg
cacacacaaaccatttttagcaaaaagacttcaaagctgtggaatcacttctctctttct
tctgcagatcccacaaaggtggtctgtttgcactgtaaccgcacaataagcagggggaaa
aagacaacaaacctgggcactagttgcttgtttaggcacatgcagaggtttcatggtcat
gtgcttgaaaataatagtaatatctcaggtgatgcatcgtctggtgaaattcaagtaaaa
cagaagcccacggatgcatctacgtatgaggagagcagtgagaaatttgatgattgtcac
ccggctgccaaaaggatcaccaaactcattgctgaaatgcttgcactggatcttcagcca
tcagctgtggtggaaaacgttggtctgaaccgattactggaatacctccaaccacagtat
tctcttccttcttcatcatacttcaccagcactgccataccagaaatgtacgaaagtgta
aaagaggttgtcctgacacacctcaaagaggctgagagtggaattattcatttcacaaca
agcatatgggtaagcagccaaacacgggaatacctgactcttacagcccactgggtgact
tttgagtcacatgtccgacctcaggggcaggatttccactgctctgctctgcttggtgtc
tccccaattgactgtgattataacatgcttagcatacagaaacaacttgaatacctttgg
gacacctggattgtttcttcaggcctgaagcttggattcatggtcactgataatcaagcc
attggaaatgtcctggaggacaatgctcacacccttatgaactgttttggtcataacata
gatctcattgttaacgaagccataaagagccagaggatggtacagagcttgttaagcatc
gcacggaagatctgtgaacgagtgcatcgttcagcaaaggcaaaggaaaagctagcggaa
cttcaaaaagcttataacttgcctgaaaatcagctgatccaggatgttccctccaagtgg
aagacctcatattttatgcttgaaaggttagttgagcaaaagaaagccattgatgaaatg
tctttagagtgcaatttcagggaacttataagctgtgaccagtgggaggtgatgcaatca
gtttgcaatgctctgaaaccttttgaggtggcctgcagggaaatgagtaatcgaacggcc
acacttggccaggtcataccactcattcatattctcaaccgcaagatagacatgcttttc
gacgagactatgggtatcgacaacatgcttaaatctctaaaagaggccatggtgaccaga
atgtctccaacacttcatgatccacgttatacatgggcaacgatgctggaccctaggtac
aagacctccctgttcaccgaggaggaagcagagaagtgtaagcaggagctcatacgagag
gttcagagggtatccatgtctgcatctgcagaaactaaacctccattgtctaacgggtgc
agtgaggacccagctccttccaacagttcaaccacaaacaaggacaacctatgggccctg
atggatgacataaggcaaaaaattaagcaagatgaccggccaaagtcgtctgagcttgcc
gttctggagtatttggaggaagatatacttgaccagagctgtgatcctttagactattgg
aatctcaagttgttcttgtggcctgagcttgccaaagtagccgtacgttatgtgggttgc
ccacctagcattgtaccagcagatacactgttcagcacatcgagtgtgaactgtgccctg
aatcagtctcgaccattgctagaaaatcttgaaagactcttatttttaaaggtcaacctt
cctttgatatattttcagtactaa
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