Ictalurus punctatus (channel catfish): 108279822
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Entry
108279822 CDS
T04658
Symbol
asb13a.1
Name
(RefSeq) ankyrin repeat and SOCS box protein 13a.1
KO
K10335
ankyrin repeat and SOCS box protein 13
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108279822 (asb13a.1)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108279822 (asb13a.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
SOCS_box
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
108279822
NCBI-ProteinID:
XP_017349804
Ensembl:
ENSIPUG00000018238
UniProt:
A0A2D0T4H5
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Position
19:19382883..19391284
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AA seq
279 aa
AA seq
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MDSPALRTCFGEIGFWSERTPVHEAASSGQVEKLQLLVDSGASVNLATVDNMTPLHDACI
QDHAECVRVLLNAGAQVDVRTIHGSTPLCHACAAGSVESVRLLLEHGASVNPSLTALTAS
PLHEACIRGNPECVKLIISKGALLEAFDIHFGTPLHSACAKAHLECALQLLNAGARVNAT
KFHETALHHAARAGRTDLIELLVEFGGDVNVSDNMGRKPIDYTAPGSPSHICLQRYESCP
LSLQQLSRITLRRVLGTRALQVITQLDISQRIISYLCYS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggattcacctgcattgaggacgtgttttggagaaattggcttctggtctgagcggaca
ccagtgcatgaggctgcgtcttcaggacaggttgagaagctgcagcttctggttgatagt
ggtgcttcagtaaacctagcgacagtagacaatatgaccccgctccacgacgcctgcata
caggatcacgcagagtgcgttcgagtgcttctgaatgccggcgcacaggtggatgtacgg
actattcatggtagcactcctctgtgccatgcgtgtgcagcaggcagtgtggagagtgtg
agactgcttctggagcatggagcttcagtgaatccctccctcacggccctcacggcctcc
ccactgcatgaggcctgcatacgaggtaatccagaatgtgtgaagctgattatatcaaaa
ggagccctgctggaggctttcgacattcactttgggacgccgctgcacagcgcctgcgct
aaagcacatctggagtgcgccttacagctgctcaatgcaggtgcccgtgtgaatgccaca
aagttccatgagacggctctgcaccacgcagcgagagcgggtcggacggacctgattgag
ctgctggtggagtttggtggagacgttaacgtcagtgacaacatgggacggaaaccgata
gattacacggcccctggatccccatctcacatctgtctacagcgctatgagagttgtcct
ctgtctctacagcagctgagtcgtatcacactgaggcgtgtcctgggcaccagagcgctg
caggtcatcacccaactagacatctcacaacgtatcatcagttacctctgttacagctaa
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