KEGG   Ictalurus punctatus (channel catfish): 108279849
Entry
108279849         CDS       T04658                                 
Name
(RefSeq) splicing factor 45
  KO
K12840  splicing factor 45
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108279849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108279849
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108279849
 Complex B
    108279849
SSDB
Motif
Pfam: G-patch RRM_1 Nha1_C SWAP1_C
Other DBs
NCBI-GeneID: 108279849
NCBI-ProteinID: XP_017349872
Ensembl: ENSIPUG00000007699
UniProt: W5U8A9
LinkDB
Position
19:10517857..10529085
AA seq 420 aa
MSLYDDLGVATSDAKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMRQTNVLAPVIDLKRG
SSVDDRQISDTPPHTAAGLKDSAPAGFSSGDVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQREQERQKEIEEREKKRKERHEGGGGGGAPSGFSRFPAEADSDEEEDYEKEKRKRVTGG
AAIAPPSSLMEKDSSYSYDDEGRQRSKAAIPPPVFEDSERPRSPPGPTSSFLANMGGTVA
HKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDLTEKTGGASQNAPETPAY
ISGAADLKKNEVNPLTEILKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVIKCVI
FEISDVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGELV
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtctctgtatgatgatttgggggtcgccaccagcgatgcaaaaactgaaggctggtcg
aagaacttcaaattgctgcaatcgcagcttaaagtgaagaaagctgccctgacacaggca
aagacgcagaggatgagacagacaaatgttctggctccagtcatcgatctgaagagggga
agcagtgtagatgacagacagatctcagacacgcctccacacacagcagcagggttgaag
gactctgcacccgctggcttttcttcaggcgatgtcctgatcccgctcgccgacgaatat
gatcccatgttccccaacgattatgagaaggtggtgaaaagacagcgagaggagcgccag
aggcagagagagcaggagcggcagaaggagatcgaggagagggagaagaagcgcaaagag
cgtcatgaaggaggaggaggaggaggagcacccagcgggttctctcgcttccctgccgag
gcggactctgacgaagaagaagactatgagaaagagaagcggaagagagttacgggtgga
gctgcgattgcacctccatcatctctaatggagaaggactcgtcatactcgtatgatgat
gaaggccgccagcggtccaaagcagcaattccgccccctgtttttgaggattctgagaga
ccgcgctcacctccaggacccaccagctccttcctggccaacatgggagggacggtggct
cacaagattatgcagaaatatggctttcgggaaggccagggcctgggcaagcatgaacag
gggcttagtacagctctgtcagtggagaaaacgagcaaacggggtgggaagatcatcgtt
ggagacctgacagaaaagactggaggagccagtcagaatgcacctgaaacgcctgcctat
atttcaggagcagcagatttgaagaagaatgaggtcaaccctctgactgagatcctcaag
tgccctacgaaggtggtgttattgcggaacatggtgggaagaggagaggtggatgaagat
ctggaagctgaaacaaaagaggagtgtgagaaatatggcaaagtcatcaagtgtgtaatc
tttgagatctcggatgtgccagatgatgaagcggtgagaatattcctggaatttgaacgg
gttgagtcggccattaaagccgtggtggatctgaacggaaggtattttggaggccgagtg
gtgaaagcctgcttctataacctggacaaattccgtgtgttagaccttggagaactggtg
tga

DBGET integrated database retrieval system