KEGG   Ictalurus punctatus (channel catfish): 108279853
Entry
108279853         CDS       T04658                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108279853 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108279853 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 108279853
NCBI-ProteinID: XP_017349885
Ensembl: ENSIPUG00000007444
UniProt: A0A2D0T5K1
LinkDB
Position
19:complement(10360128..10403531)
AA seq 1774 aa
MWTLQCALIWALGLAVPAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLHSPE
PFCIVSNLGAEKCFECDSRGLYNKVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVETVTI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDYGQSWQVYRYFAFNCSASFPDISQGPVK
SVDDVICDSRYSTIEPSTEGEVIFRALDPVFKIPDPYSQRIQNLLKITNLRVRMMKLHTL
GDDLLDGQDEVKQKYYYALYDMVVRGNCFCYGHASECAPADDSETGPEGMVYGHCVCNHH
TAGLNCEKCQDFYQDTPWRPAEGRNTNACKRCECNQHSYACHFDMAMYVSSGNVSGGVCD
DCQHNTQGQHCEGCKPFYYQHPNRDIRDPRSCEPCDCDLRGSLNGGVCDSVTDVMRGLIA
GQCRCKQNVEGERCDHCKQGHYGLGQDLLGCLSCSCNPLGTLPGGSPCDTATGMCYCKRL
VTGRNCDQCQPQHWGLSTDKDGCRPCDCDVGGALNNDCSPQTGQCVCREHISGRRCDSMK
PGYYFAALDHYTYEAEEAAFDPAVTVVARPLPADRPPTWTGIGFASVPERETLAFTIDNI
PQSMEYDLLIRYEPQLPDVWEEVRIDVIRTDQPSPSAHCSAPYADQQTTSLPPSSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLHDQPHILIDSIVLLPVVRDLDLDLFSGAADREAA
WEMFQKYRCLENSKSVQKIPMTDICREYIFSASALLHQGAMECKCDPLGSLSMICDVNGG
QCPCRPNVVGRTCDSCAPGTLQLGPSGCRPCECDPLGSKNTFCNSTTGQCSCLPGVYGRQ
CAHCLHGHWGFPQCQPCFCNGHGERCDLHTGRCLECRDHTTGDQCERCDRGYHGNALLGS
SDRCRPCMCPDGPGSGRQFADTCYQNPNSLQLVCVCSQGYKGPRCEECAPGYYGNPKVSG
GRCHPCRCNGNIDMQDPMSCDASTGTCLRCLHNTDGQACQHCRHGYYGDASTQNCQKCMC
QLLGTDSHKCVNGECECDQVSGQCPCLPSVEGLHCDRCAPNTWNFHSGKGCQLCQCHPTH
AYSLSCDRMSGQCSCMPGFGGRTCEECRALFWGDPEVRCHACDCDPRGTSTPQCNKSTGA
CVCVEGAAGQRCDSCGRGYVGTFPDCQPCHQCFREWEVTVGELTNQTQQLVDTVENLKVT
GVTAAYRDTIDSLEDGAKQLTQILEDDKAQQTLRYSQEFLQKAKSLTSDLDRSLNRSEVD
VQQVSEEHGSVAEELKSLSLETQKQQERFNSTQQQVLHIKHSDPVGAVDSVKEYYQQSVE
AESRVNQATTDTHSPMKQSAGLRQATEAKLDTVKGEFDLKQRLDSEILNTLNQELEQDDL
PQLSQQVCGGEWNRDGCGECGGLGCVGEDGEPQCGGQDCKGVITQTNNAWKKAKDLDKDI
MDSLKEVEKLQRIVSAAQGRAAESKISAQDILSKANQSKARVEQTNQELRELIQQIRDFL
TSGADLERIEALSDEVLKLKMPVVAGELKNVTTEIRQHVDSLTGVDDVLVQSAGQAQTAE
RLLQQARVISEEATQLKGEVDKVKTMLNESKHAQSAADESLKAVNSDIDYTQQQIAMVDS
EMGMSELMLSNATRRLLDLKRNEGALRQKTRETSNSAELAQNKADYTSEDTEQTERTLIL
EVQPKYQSALGLMEEKAVGVSDARQRAEQLQQEAKNLVTEAISKLQNLNELEKTFAVNQR
TLAERAQEVEALEKEAQTVLQELSQRVTVYSTCQ
NT seq 5325 nt   +upstreamnt  +downstreamnt
atgtggactttacagtgtgcattgatttgggctttgggtttagctgtcccggcacagctt
cttcctgaagctaacaatatgtgttcagagggaagctgttaccctgccacaggtgacctg
ttgatcggcagagctcatcgtcttacagcctcgtccacctgtggactccactctcccgaa
cccttctgcatcgtcagcaacctaggggctgagaagtgttttgagtgtgactctcgggga
ctctacaacaaggtcacacaccccaatagccacaccatcgacaacgtggtcacaaccttt
actcccaaccgtctcgtaacatggtggcagtctgaaaatggagtagaaactgtgaccatt
caactggatttagaagctgagttccacttcacacatatcatcatgacctttaagacgttt
cgtcctgcggcgatggtgattgagcgttcatcagattatgggcagagctggcaggtgtac
cgttactttgctttcaactgctccgcttcttttccagacatctcccagggtccagtcaag
agtgttgatgatgtcatctgtgactcccggtactctaccattgagccttcaacagaggga
gaggtgattttccgagcgcttgatcctgtgtttaagatccctgatccctacagccagcga
atccagaacctcttgaaaataactaacctgcgagtgcggatgatgaagttgcacaccctc
ggcgatgacctgctggatggtcaagatgaagtgaagcagaagtactactatgctctctat
gatatggttgtccgtggcaactgcttctgttacggccacgcctccgagtgtgcgccggca
gacgatagtgagacggggcctgaaggcatggtctatggtcattgtgtgtgtaatcatcac
actgctggcttaaactgtgagaagtgtcaagacttttatcaagacacaccgtggagacct
gcagagggccgaaacaccaacgcgtgcaagagatgtgagtgtaaccagcactcatatgcg
tgccacttcgacatggcgatgtacgtgtcgtcggggaacgtgagcggaggagtgtgtgat
gattgtcaacacaacacacaggggcagcactgtgagggttgcaagcccttctactaccag
catcctaacagggacataagagatcctcgcagctgtgaaccgtgcgactgtgacttacgg
ggctcactgaacggcggtgtgtgtgacagcgtgacagacgtaatgaggggacttatcgct
ggtcagtgtcgctgtaagcagaatgtggagggagaacgctgtgatcactgcaaacaagga
cactatggacttggccaagacctgctaggctgcctctcatgcagctgtaatcctctgggc
acacttcctggaggaagtccctgtgacacggctacaggaatgtgttattgcaaacgcctt
gtcaccgggcgaaactgtgaccagtgtcagcctcagcactggggcctgagcacagataag
gatggttgtcggccatgtgactgcgatgttggaggagctctgaacaacgattgttctcca
cagacagggcagtgtgtgtgtagagagcacatatctggcagacgttgtgacagcatgaag
cctggttattatttcgctgcccttgaccactacacttacgaggcagaggaagctgcattc
gatccggctgtaacggtggtggcgaggcctctgcctgcagatcggcccccgacctggact
ggtattggattcgccagcgtacctgaaagagaaacattggcatttaccattgacaacatc
ccacagtctatggaatatgacttgttgatccgctatgaacctcagttgccagatgtgtgg
gaggaggtgaggatagatgtaatacgtactgatcaaccttccccatctgcacactgttca
gctccttacgctgaccaacagaccacatcacttcctccaagctccaggtatgtggtactg
cccaggccactgtgtttggaaaagggccagaaatacacagtgaaaatgatcctagcgctt
ttttcctcaaacgatctccatgaccagccgcacatactgatcgactctattgtgctgttg
cctgtggtgcgagatctggacctggacctgttctcaggagcagctgacagggaggcagcg
tgggaaatgtttcagaaataccgctgtctcgagaacagcaagagtgtccagaaaattccc
atgaccgacatctgcagagaatacatcttcagcgcatcagccctgctgcaccagggagct
atggaatgtaagtgtgacccactgggctctctcagtatgatttgtgatgttaatggtgga
cagtgcccgtgccggccaaatgtggtgggcaggacgtgcgacagctgcgccccaggcacc
ctccagctcggaccctccggctgcaggccatgtgagtgtgacccgttgggctcaaagaac
actttctgcaattcgaccacaggccagtgctcgtgtttacctggcgtttacggtcgtcag
tgtgcccactgtctacacggacactggggcttcccacagtgtcaaccctgcttctgtaat
gggcacggggagcgctgtgaccttcacacaggccggtgcttggagtgcagagaccacacc
acaggagaccagtgtgagaggtgcgatagaggttaccatggcaatgcgttactaggcagc
agcgaccgctgtcggccctgtatgtgtccagatggcccagggagcggaagacagtttgca
gacacctgctaccaaaaccccaactcgctccagctcgtctgtgtgtgtagccaaggatac
aaaggaccaagatgtgaggaatgtgcacctggttactatggcaacccgaaggtgtcaggt
ggacggtgccacccatgccggtgtaacggcaacattgacatgcaagacccgatgtcctgc
gatgccagcactggcacctgtctcagatgcctgcacaacactgatggccaggcgtgtcag
cactgtcgccatggctactacggggatgctagcactcagaactgccagaagtgtatgtgc
cagcttttgggcactgacagccacaagtgtgtaaacggtgagtgtgagtgtgaccaagtg
agtgggcagtgcccatgtctacccagtgtagagggtctgcactgtgaccgctgtgcccca
aacacctggaatttccatagtggaaaaggctgccagctatgccagtgtcatcccacacac
gcttacagcctgtcctgcgacaggatgtccggtcagtgctcctgtatgccaggttttggt
ggcaggacctgtgaggagtgtagagctctgttctggggtgatccagaagtcaggtgtcat
gcatgtgattgtgatccacgaggcacctctacaccacagtgtaacaagtcaacaggagca
tgcgtgtgtgtggagggcgcagccggtcagcggtgtgactcatgtgggcggggttatgtg
ggaaccttcccagattgccagccgtgtcatcagtgcttccgtgaatgggaagtcactgtg
ggcgagctgaccaatcagacgcagcagttggtggacacagtggaaaacctgaaagtgacc
ggtgtgaccgcagcctatcgggacacgatagacagtctggaagacggagccaagcagctc
actcagatactagaggatgacaaggctcagcaaactcttagatactctcaagagtttctg
cagaaagccaagagtctcacatctgatctggaccgctctctgaaccgctcggaggtggac
gtacagcaggtctccgaggaacacggcagtgttgcggaggagctcaaatcgcttagtctg
gagactcagaaacagcaagaacgctttaatagcacacagcaacaggtgctgcacatcaaa
cactccgacccagtgggtgcagtagacagcgttaaggaatattaccagcagtcagtggag
gcagagagccgagtcaatcaggccaccacagacacacacagcccaatgaagcaatcagct
ggtctacggcaagccacagaggccaaactggacaccgtgaagggagagtttgacctcaaa
caacggctggactctgagatactgaacacactgaaccaggagctggagcaagatgacctt
ccacaactcagccagcaggtgtgtggtggagagtggaaccgagacggctgtggagaatgt
ggaggtttggggtgtgtgggtgaggacggagagcctcagtgcggaggacaggactgtaaa
ggtgtgattactcaaactaacaacgcatggaaaaaagctaaagacctggacaaggacatc
atggactcactaaaagaagtggaaaagctccaaagaatagtgtccgctgctcaaggacgt
gcagctgagagtaaaatcagtgcacaggacatcctgtcgaaggccaatcagagcaaagca
agagttgagcagaccaatcaggagctacgagagctcattcagcaaatacgagactttctt
acaagtggagcagatctggagcgtattgaagcactatctgatgaagttctgaagctgaag
atgccggtggttgccggcgagctgaagaatgtgaccacagagatccggcagcacgtggac
agtctgaccggtgtggacgacgtcctggttcaaagtgctggacaggcacaaacagctgag
agactgctgcaacaggcacgcgttatcagtgaggaagctacacaactgaagggggaagta
gacaaggtgaagacgatgctaaatgaatccaagcacgctcaatctgcagcagatgagagc
ttgaaagcagtcaacagtgacattgactacacacaacaacaaatagctatggtggactcc
gagatggggatgtccgagttaatgctgagtaacgccactcggcggttgctggatcttaag
aggaacgagggtgcgttgcgacagaaaactcgggagacctccaacagtgcagaacttgct
cagaacaaggccgactacacctctgaggacacggaacaaaccgaacggacactgatttta
gaggtgcagcctaaataccagtcggctctgggcctgatggaggagaaagcagttggtgta
tctgatgcacgccaaagagcagaacaactccagcaggaggcaaagaacttagtgactgag
gccatcagcaaattacagaatctaaacgagctggagaagactttcgcggtgaatcagagg
actctggcagagagagcgcaggaggtggaggcgctggagaaggaagcgcagaccgtgctc
caggagctcagccagagagtcacagtatacagcacctgtcaataa

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