Ictalurus punctatus (channel catfish): 108279853
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Entry
108279853 CDS
T04658
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108279853 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108279853 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108279853
NCBI-ProteinID:
XP_017349885
Ensembl:
ENSIPUG00000007444
UniProt:
A0A2D0T5K1
LinkDB
All DBs
Position
19:complement(10360128..10403531)
Genome browser
AA seq
1774 aa
AA seq
DB search
MWTLQCALIWALGLAVPAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLHSPE
PFCIVSNLGAEKCFECDSRGLYNKVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVETVTI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDYGQSWQVYRYFAFNCSASFPDISQGPVK
SVDDVICDSRYSTIEPSTEGEVIFRALDPVFKIPDPYSQRIQNLLKITNLRVRMMKLHTL
GDDLLDGQDEVKQKYYYALYDMVVRGNCFCYGHASECAPADDSETGPEGMVYGHCVCNHH
TAGLNCEKCQDFYQDTPWRPAEGRNTNACKRCECNQHSYACHFDMAMYVSSGNVSGGVCD
DCQHNTQGQHCEGCKPFYYQHPNRDIRDPRSCEPCDCDLRGSLNGGVCDSVTDVMRGLIA
GQCRCKQNVEGERCDHCKQGHYGLGQDLLGCLSCSCNPLGTLPGGSPCDTATGMCYCKRL
VTGRNCDQCQPQHWGLSTDKDGCRPCDCDVGGALNNDCSPQTGQCVCREHISGRRCDSMK
PGYYFAALDHYTYEAEEAAFDPAVTVVARPLPADRPPTWTGIGFASVPERETLAFTIDNI
PQSMEYDLLIRYEPQLPDVWEEVRIDVIRTDQPSPSAHCSAPYADQQTTSLPPSSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLHDQPHILIDSIVLLPVVRDLDLDLFSGAADREAA
WEMFQKYRCLENSKSVQKIPMTDICREYIFSASALLHQGAMECKCDPLGSLSMICDVNGG
QCPCRPNVVGRTCDSCAPGTLQLGPSGCRPCECDPLGSKNTFCNSTTGQCSCLPGVYGRQ
CAHCLHGHWGFPQCQPCFCNGHGERCDLHTGRCLECRDHTTGDQCERCDRGYHGNALLGS
SDRCRPCMCPDGPGSGRQFADTCYQNPNSLQLVCVCSQGYKGPRCEECAPGYYGNPKVSG
GRCHPCRCNGNIDMQDPMSCDASTGTCLRCLHNTDGQACQHCRHGYYGDASTQNCQKCMC
QLLGTDSHKCVNGECECDQVSGQCPCLPSVEGLHCDRCAPNTWNFHSGKGCQLCQCHPTH
AYSLSCDRMSGQCSCMPGFGGRTCEECRALFWGDPEVRCHACDCDPRGTSTPQCNKSTGA
CVCVEGAAGQRCDSCGRGYVGTFPDCQPCHQCFREWEVTVGELTNQTQQLVDTVENLKVT
GVTAAYRDTIDSLEDGAKQLTQILEDDKAQQTLRYSQEFLQKAKSLTSDLDRSLNRSEVD
VQQVSEEHGSVAEELKSLSLETQKQQERFNSTQQQVLHIKHSDPVGAVDSVKEYYQQSVE
AESRVNQATTDTHSPMKQSAGLRQATEAKLDTVKGEFDLKQRLDSEILNTLNQELEQDDL
PQLSQQVCGGEWNRDGCGECGGLGCVGEDGEPQCGGQDCKGVITQTNNAWKKAKDLDKDI
MDSLKEVEKLQRIVSAAQGRAAESKISAQDILSKANQSKARVEQTNQELRELIQQIRDFL
TSGADLERIEALSDEVLKLKMPVVAGELKNVTTEIRQHVDSLTGVDDVLVQSAGQAQTAE
RLLQQARVISEEATQLKGEVDKVKTMLNESKHAQSAADESLKAVNSDIDYTQQQIAMVDS
EMGMSELMLSNATRRLLDLKRNEGALRQKTRETSNSAELAQNKADYTSEDTEQTERTLIL
EVQPKYQSALGLMEEKAVGVSDARQRAEQLQQEAKNLVTEAISKLQNLNELEKTFAVNQR
TLAERAQEVEALEKEAQTVLQELSQRVTVYSTCQ
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtggactttacagtgtgcattgatttgggctttgggtttagctgtcccggcacagctt
cttcctgaagctaacaatatgtgttcagagggaagctgttaccctgccacaggtgacctg
ttgatcggcagagctcatcgtcttacagcctcgtccacctgtggactccactctcccgaa
cccttctgcatcgtcagcaacctaggggctgagaagtgttttgagtgtgactctcgggga
ctctacaacaaggtcacacaccccaatagccacaccatcgacaacgtggtcacaaccttt
actcccaaccgtctcgtaacatggtggcagtctgaaaatggagtagaaactgtgaccatt
caactggatttagaagctgagttccacttcacacatatcatcatgacctttaagacgttt
cgtcctgcggcgatggtgattgagcgttcatcagattatgggcagagctggcaggtgtac
cgttactttgctttcaactgctccgcttcttttccagacatctcccagggtccagtcaag
agtgttgatgatgtcatctgtgactcccggtactctaccattgagccttcaacagaggga
gaggtgattttccgagcgcttgatcctgtgtttaagatccctgatccctacagccagcga
atccagaacctcttgaaaataactaacctgcgagtgcggatgatgaagttgcacaccctc
ggcgatgacctgctggatggtcaagatgaagtgaagcagaagtactactatgctctctat
gatatggttgtccgtggcaactgcttctgttacggccacgcctccgagtgtgcgccggca
gacgatagtgagacggggcctgaaggcatggtctatggtcattgtgtgtgtaatcatcac
actgctggcttaaactgtgagaagtgtcaagacttttatcaagacacaccgtggagacct
gcagagggccgaaacaccaacgcgtgcaagagatgtgagtgtaaccagcactcatatgcg
tgccacttcgacatggcgatgtacgtgtcgtcggggaacgtgagcggaggagtgtgtgat
gattgtcaacacaacacacaggggcagcactgtgagggttgcaagcccttctactaccag
catcctaacagggacataagagatcctcgcagctgtgaaccgtgcgactgtgacttacgg
ggctcactgaacggcggtgtgtgtgacagcgtgacagacgtaatgaggggacttatcgct
ggtcagtgtcgctgtaagcagaatgtggagggagaacgctgtgatcactgcaaacaagga
cactatggacttggccaagacctgctaggctgcctctcatgcagctgtaatcctctgggc
acacttcctggaggaagtccctgtgacacggctacaggaatgtgttattgcaaacgcctt
gtcaccgggcgaaactgtgaccagtgtcagcctcagcactggggcctgagcacagataag
gatggttgtcggccatgtgactgcgatgttggaggagctctgaacaacgattgttctcca
cagacagggcagtgtgtgtgtagagagcacatatctggcagacgttgtgacagcatgaag
cctggttattatttcgctgcccttgaccactacacttacgaggcagaggaagctgcattc
gatccggctgtaacggtggtggcgaggcctctgcctgcagatcggcccccgacctggact
ggtattggattcgccagcgtacctgaaagagaaacattggcatttaccattgacaacatc
ccacagtctatggaatatgacttgttgatccgctatgaacctcagttgccagatgtgtgg
gaggaggtgaggatagatgtaatacgtactgatcaaccttccccatctgcacactgttca
gctccttacgctgaccaacagaccacatcacttcctccaagctccaggtatgtggtactg
cccaggccactgtgtttggaaaagggccagaaatacacagtgaaaatgatcctagcgctt
ttttcctcaaacgatctccatgaccagccgcacatactgatcgactctattgtgctgttg
cctgtggtgcgagatctggacctggacctgttctcaggagcagctgacagggaggcagcg
tgggaaatgtttcagaaataccgctgtctcgagaacagcaagagtgtccagaaaattccc
atgaccgacatctgcagagaatacatcttcagcgcatcagccctgctgcaccagggagct
atggaatgtaagtgtgacccactgggctctctcagtatgatttgtgatgttaatggtgga
cagtgcccgtgccggccaaatgtggtgggcaggacgtgcgacagctgcgccccaggcacc
ctccagctcggaccctccggctgcaggccatgtgagtgtgacccgttgggctcaaagaac
actttctgcaattcgaccacaggccagtgctcgtgtttacctggcgtttacggtcgtcag
tgtgcccactgtctacacggacactggggcttcccacagtgtcaaccctgcttctgtaat
gggcacggggagcgctgtgaccttcacacaggccggtgcttggagtgcagagaccacacc
acaggagaccagtgtgagaggtgcgatagaggttaccatggcaatgcgttactaggcagc
agcgaccgctgtcggccctgtatgtgtccagatggcccagggagcggaagacagtttgca
gacacctgctaccaaaaccccaactcgctccagctcgtctgtgtgtgtagccaaggatac
aaaggaccaagatgtgaggaatgtgcacctggttactatggcaacccgaaggtgtcaggt
ggacggtgccacccatgccggtgtaacggcaacattgacatgcaagacccgatgtcctgc
gatgccagcactggcacctgtctcagatgcctgcacaacactgatggccaggcgtgtcag
cactgtcgccatggctactacggggatgctagcactcagaactgccagaagtgtatgtgc
cagcttttgggcactgacagccacaagtgtgtaaacggtgagtgtgagtgtgaccaagtg
agtgggcagtgcccatgtctacccagtgtagagggtctgcactgtgaccgctgtgcccca
aacacctggaatttccatagtggaaaaggctgccagctatgccagtgtcatcccacacac
gcttacagcctgtcctgcgacaggatgtccggtcagtgctcctgtatgccaggttttggt
ggcaggacctgtgaggagtgtagagctctgttctggggtgatccagaagtcaggtgtcat
gcatgtgattgtgatccacgaggcacctctacaccacagtgtaacaagtcaacaggagca
tgcgtgtgtgtggagggcgcagccggtcagcggtgtgactcatgtgggcggggttatgtg
ggaaccttcccagattgccagccgtgtcatcagtgcttccgtgaatgggaagtcactgtg
ggcgagctgaccaatcagacgcagcagttggtggacacagtggaaaacctgaaagtgacc
ggtgtgaccgcagcctatcgggacacgatagacagtctggaagacggagccaagcagctc
actcagatactagaggatgacaaggctcagcaaactcttagatactctcaagagtttctg
cagaaagccaagagtctcacatctgatctggaccgctctctgaaccgctcggaggtggac
gtacagcaggtctccgaggaacacggcagtgttgcggaggagctcaaatcgcttagtctg
gagactcagaaacagcaagaacgctttaatagcacacagcaacaggtgctgcacatcaaa
cactccgacccagtgggtgcagtagacagcgttaaggaatattaccagcagtcagtggag
gcagagagccgagtcaatcaggccaccacagacacacacagcccaatgaagcaatcagct
ggtctacggcaagccacagaggccaaactggacaccgtgaagggagagtttgacctcaaa
caacggctggactctgagatactgaacacactgaaccaggagctggagcaagatgacctt
ccacaactcagccagcaggtgtgtggtggagagtggaaccgagacggctgtggagaatgt
ggaggtttggggtgtgtgggtgaggacggagagcctcagtgcggaggacaggactgtaaa
ggtgtgattactcaaactaacaacgcatggaaaaaagctaaagacctggacaaggacatc
atggactcactaaaagaagtggaaaagctccaaagaatagtgtccgctgctcaaggacgt
gcagctgagagtaaaatcagtgcacaggacatcctgtcgaaggccaatcagagcaaagca
agagttgagcagaccaatcaggagctacgagagctcattcagcaaatacgagactttctt
acaagtggagcagatctggagcgtattgaagcactatctgatgaagttctgaagctgaag
atgccggtggttgccggcgagctgaagaatgtgaccacagagatccggcagcacgtggac
agtctgaccggtgtggacgacgtcctggttcaaagtgctggacaggcacaaacagctgag
agactgctgcaacaggcacgcgttatcagtgaggaagctacacaactgaagggggaagta
gacaaggtgaagacgatgctaaatgaatccaagcacgctcaatctgcagcagatgagagc
ttgaaagcagtcaacagtgacattgactacacacaacaacaaatagctatggtggactcc
gagatggggatgtccgagttaatgctgagtaacgccactcggcggttgctggatcttaag
aggaacgagggtgcgttgcgacagaaaactcgggagacctccaacagtgcagaacttgct
cagaacaaggccgactacacctctgaggacacggaacaaaccgaacggacactgatttta
gaggtgcagcctaaataccagtcggctctgggcctgatggaggagaaagcagttggtgta
tctgatgcacgccaaagagcagaacaactccagcaggaggcaaagaacttagtgactgag
gccatcagcaaattacagaatctaaacgagctggagaagactttcgcggtgaatcagagg
actctggcagagagagcgcaggaggtggaggcgctggagaaggaagcgcagaccgtgctc
caggagctcagccagagagtcacagtatacagcacctgtcaataa
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integrated database retrieval system