Ictalurus punctatus (channel catfish): 108279880
Help
Entry
108279880 CDS
T04658
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1a isoform X1
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108279880 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108279880 (atp2b1a)
Enzymes [BR:
ipu01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
108279880 (atp2b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
Cation_ATPase
ATP_Ca_trans_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
108279880
NCBI-ProteinID:
XP_017349940
Ensembl:
ENSIPUG00000023366
UniProt:
A0A2D0T5P2
LinkDB
All DBs
Position
19:complement(23474862..23516670)
Genome browser
AA seq
1261 aa
AA seq
DB search
MANNSYTGVKNSVAEPNHDGEFGCSLKELRSLMELRGAEGLHKIQDCYGDVNGLCGRLKT
SPIDGLSGNPADIESRKLAFGQNFIPPKKPKTFLQLVWEALQDVTLIILEVAAIISLGLS
FYRPPDLEDKKCGEGAGGAEDEGESEAGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGL
QNRIEQEQKFTVMRAGQVIQIPVAEIVVGDIAQIKYGDLLPADGVLIQGNDLKIDESSLT
GESDHVKKLLDKDPMLLSGTHVMEGSGKMVVTAIGVNSQTGIIFTLLGAGEDDDDDEEKE
EKKKEKERKKEKKNKKQDGSVENRKKAKAQDGAAMEMQPLNSDEGADADEKRKANLPKKE
KSVLQGKLTKLAVQIGKAGLVMSAITVIILVVLFIVNTFWVRGLPWEKSCTPIYVQYFVK
FFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG
TLTMNRMTVVQAYIADQHYRKVPEPEVIPASIMDLLVLGISVNSAYTTKILPPEKEGGLC
RQVGNKTECALLGFVLDLKKDYQAIRNEISEEKLYKVYTFNSVRKSMSTVLKNADGSFRM
FSKGASEILLKKCSKILTATGESKVFRPRDRDDMVKKVIEPMASEGLRTICLAYRDFPAS
EGEPDWENEADILTRLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARAI
ASKCGILQPGDDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVK
GIIDSTVLEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSI
VKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFA
SLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAVYQLTVIFTLLFAGERLFDIDS
GRNAPLHAPPSEHYTVVFNTFVLMQLFNEINARKIHGERNVFDGIFNNLIFCFIVFGTFI
IQFVIVQFGGKPFSCVALTIDQWLWCVFLGCGSLLWGQVISSIPTSRLKFLKTAGHGTQK
EEIPDEELEDMEDLEEIDHAERELRRGQILWFRGLNRIQTQMDVVSAFQSGTSFQGALRR
HPSSTSQQHDIRVVNAFRSSLSPYEGLEKPESRSSIHNFMTHPEFRIEDSEPHIPLIDDT
DAEDDAPTKRNATPTPPPPPSPSPNQNNNAVDSGVHLFLDNSKPATPSAPASPMHSVETS
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaactcgtacaccggcgtgaagaactccgtagcggagcccaatcacgatggg
gaattcggctgctcgctcaaagagctgcgctcgctcatggaactgcggggggccgaggga
ttacacaaaatccaggattgttacggggacgtcaacggactctgcggcagactgaaaacg
tcgcctatagatggtttaagcgggaaccctgccgatatcgaaagcagaaaattagcgttt
ggacagaactttatacctccgaaaaagccaaaaacctttcttcaattagtatgggaagca
ttacaagacgtaacgttgattattctagaagtggcagccataatttcattaggcctttct
ttttatagacctccggatttagaggataaaaaatgcggggagggagcaggaggcgcagaa
gacgagggcgagtccgaggcaggatggatcgagggagcggccatcctcctctctgttgtc
tgcgtggtgctagtgacggcttttaacgactggagtaaagagaagcagttccgtggctta
cagaaccgcatcgaacaagagcagaagtttacagtgatgcgcgctgggcaagtcattcag
atccccgtggctgagattgtagtcggggatattgcacaaatcaaatacggtgacctctta
cctgccgacggcgttctcatccaagggaacgatcttaaaatcgacgagagctctctgacg
ggagaatcggaccacgtgaagaaactgctggataaagatcccatgctgttgtcaggtacc
catgtcatggagggctctggaaaaatggtcgtcactgccatcggagtcaactcccagacc
ggaatcatcttcacgttactgggggcaggagaggacgacgacgacgacgaggagaaagag
gagaagaagaaagaaaaagagaggaagaaggagaagaaaaacaaaaagcaagacggctct
gtggagaacagaaagaaagctaaagcccaggatggagctgcaatggaaatgcagcccctg
aacagcgacgaaggagcagatgcagatgagaagcgcaaagccaacttgcccaaaaaagag
aaatccgttctccaagggaagctgactaaactagcagtccaaattggcaaagcaggtctg
gtgatgtccgccatcaccgtcataatcctggtggtgttgtttatagtgaacaccttttgg
gtgcgagggcttccgtgggagaaaagctgcacgccaatatacgtccagtatttcgtcaag
ttcttcatcatcggcgtgaccgtcttggtggtggccgtccctgagggcctgcctcttgcc
gtcactatttcactggcttactctgtcaaaaaaatgatgaaggacaacaatttggtgagg
catttagatgcctgcgagaccatgggcaatgctactgccatctgttcagataagacaggc
actctgaccatgaacaggatgactgtggtgcaggcttacatcgcagatcagcactacagg
aaggtccctgagccggaagtaatccctgccagcatcatggacctgctcgttctgggcatc
agcgtcaacagtgcttataccaccaagatcctgcctcccgagaaggagggaggtctatgt
cgtcaggtgggcaacaaaaccgaatgtgccttgctcggcttcgtgttggacctgaaaaaa
gactaccaagcaatccgcaacgagatctccgaggagaagctctataaagtttacacgttc
aactctgtcaggaaatccatgagcaccgtgttgaagaacgctgacggaagcttccggatg
tttagcaaaggagcctcggaaattctactcaagaaatgttccaagatcctcacagcgacc
ggtgagagtaaggtgttccggcccagagacagggatgacatggtgaagaaagtgatcgag
cccatggcctctgaaggcctgaggacaatatgcctggcctacagagacttccccgcttca
gaaggggaacccgactgggaaaacgaggccgatatactcaccagactcacctgtttgtgc
gtggtgggcatcgaggacccagtcagaccggaagtccccgacgcgatcaggaagtgccag
cgtgccgggatcacagtacgtatggtcaccggggacaacatcaacacggctcgcgccata
gcgtccaagtgcggcatcctgcagcccggagacgacttcctctgcctggaaggtaaagaa
ttcaaccggcggatacgcaacgagaagggagagatcgaacaggagaggatcgataaaata
tggcctaaactccgagtcctggcgagatcgtctccgacagacaagcacacgttggttaaa
ggtatcatcgacagcactgttctagaacagaggcaagtagtagcggtaacaggagacggt
acaaacgacggccctgccttgaaaaaggccgatgtcggattcgctatgggcatcgcgggc
acagacgtagctaaagaggcttccgacatcattctcaccgacgacaatttctccagcatc
gtcaaagctgtcatgtggggccgcaacgtctacgacagcatctccaaattcctgcagttc
cagctcacggtcaacgtagtggccgtgatcgtggccttcaccggagcgtgcatcacacag
gattctccattgaaagcagtacagatgttgtgggtaaatctgatcatggacaccttcgca
tcgctagctctggccaccgaacctcccacggagtctctgctgctgaggaagccgtacggc
cggaacaaacccctcatctccagaaccatgatgaagaacatcctgggccatgccgtctac
cagctcaccgtcatcttcactctgttgtttgcaggtgaaaggctgttcgacatcgacagc
ggccgtaacgcccctctccacgctccgccctccgagcactacaccgtcgtcttcaacacc
ttcgtgttgatgcagctcttcaacgagatcaacgcccgcaagatccacggcgagaggaac
gtcttcgacggtatcttcaacaacctcatcttctgcttcatcgtcttcggcacgttcatc
atccagttcgtcatcgtgcagtttggaggcaagcccttcagctgtgtggctcttaccatc
gaccagtggctctggtgcgtcttcttaggctgtggctccctgctctggggtcaggtgatc
tcctccatcccgaccagccgcctgaagttcctgaagacggccggtcacggaactcagaag
gaggagattccagacgaggagctggaggacatggaggacctggaagagatcgaccacgcc
gagcgtgagctccgcagggggcagatactctggttccgaggcctgaacaggatacagact
cagatggatgtagtgagtgcgttccagagcggcacttcctttcagggggccctcaggcgt
cacccctcgagcaccagccaacagcacgatatccgagtagtgaatgcattccgcagctcc
ctgtccccctatgaggggctggagaagcccgagtcgcgcagctcaatccacaacttcatg
acccacccggagttccggatagaggactcggagccccacatccccctcatcgacgacacg
gatgccgaggacgacgcccccacgaagagaaacgccacccccacaccccctccacctccc
tctccgtcgcccaaccagaacaataacgccgtggacagtggcgtccacctcttcttagac
aacagcaagccggccacgccctcggccccggcgagccccatgcacagcgtggagacgtcc
ctctga
DBGET
integrated database retrieval system
