Ictalurus punctatus (channel catfish): 108279921
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Entry
108279921 CDS
T04658
Name
(RefSeq) EKC/KEOPS complex subunit TPRKB
KO
K15901
EKC/KEOPS complex subunit TPRKB/CGI121
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108279921
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
KEOPS/EKC complex
108279921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CGI-121
Dynamitin
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
108279921
NCBI-ProteinID:
XP_017350048
Ensembl:
ENSIPUG00000009763
UniProt:
W5UCP4
LinkDB
All DBs
Position
19:12871391..12874308
Genome browser
AA seq
175 aa
AA seq
DB search
MHLSNSLELFPEFVVTQLLFKDVKNCAELRKMAMEGKIAGALINPSVVLDPFQTLLAANK
AVHVQKIGKMKTRSLYSEIIFNLSPTNNISEAFKRFGVSDSDNAVLIVLVHNKEEAYNKD
DVLSKVDGQQIPADQMSTLSDLAKIKKLYKVAPQEEKCGNVLDAVICRMAAKDFV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaagtaatagtttggagctgtttccggagttcgttgtgactcagttgcttttc
aaagacgttaaaaactgtgcagaattgagaaagatggcaatggaggggaaaatagccggc
gcgctgataaacccatccgtggtgttggatccctttcaaacactactagcagcaaataaa
gcagtccatgtgcagaagattggaaaaatgaagacaaggagcttatactctgaaatcatc
ttcaatctttcaccaacaaacaatatctctgaggcttttaaaaggtttggggtctccgac
agtgacaatgcggttctcattgtcctggttcataacaaagaggaagcatacaataaggat
gatgtcctgtctaaggtggatggccagcagatcccagctgatcaaatgtccaccctcagt
gatcttgccaagattaaaaagctttacaaagttgcaccccaagaggaaaagtgtggaaat
gttttagatgctgttatctgcagaatggctgctaaggattttgtatag
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