Ictalurus punctatus (channel catfish): 108279927
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Entry
108279927 CDS
T04658
Name
(RefSeq) glutamate receptor-interacting protein 1 isoform X6
KO
K20251
glutamate receptor-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108279927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279927
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
108279927
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108279927
NCBI-ProteinID:
XP_017350069
Ensembl:
ENSIPUG00000015957
UniProt:
A0A2D0T594
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All DBs
Position
19:17501965..17805864
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AA seq
1141 aa
AA seq
DB search
MDRFLGFVKQIRRSRRRKGKKYRPEEDYHEGYEDVYYYASEHLHNEGPYTKHSNPSRSPD
GALAIRRQSIPDEFKGSSMVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQ
LNVGDYIKSVNGINLTKFRHDEIISLLKNVGERVVLEVEYELPPVSVQGSGVMFKNVEVT
LHKEGNTFGFVIRGGAHEDRNKSRPVTITTIRPGGPADREGTIKPGDRLLSIDGIRLHGT
SHAEAMSILKQCGQEATLLIEFDVSIMDSIASASGPLLVEVAKPLGSSLGVALSTSMYCN
KQVIIIDKVKPASIADRCGALHAGDHILSVDGTSMEYCTLAEATQLLASACEHVKMEILP
HHQTRLALKASDHVKVQRSNRPLPWESGTNNNSNFLPYQHYNTYHPDQSRSQAKQKSSPN
NPPLGSSFSPTSMSAYSLSSLNMSTLPRNMYPTSPRSTLMRRKLKKKDYKSSLSLASSTV
GLAGQVVHTETTEVTLVSDSIMGFGIQLQGGVFATETLTSPPLIAYIDHDSPAERCGVLQ
IGDRLLSINGIPTEDSTLEETNQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKK
PGVELGITISSPSNRKPGDSLIISDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDA
VQILQQCEELVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGPLGITISGTEEPFDPIII
SSLTKGGLAERTGAIHVGDRILAINNNSLKGKPLSEAIHLLQMAGESVTLKIKKQGELAS
PKQPSVTGHLGELSDAEDENQQKPGKLSDIYSTTIPSVDSAVESWDGSAIDASFIPQVPT
GFQASGYSFHSHEWRNAKVTRGSVSPSSGRQRSTVLQDLGLSDDEWDKPSASGFTVAHDG
TEPDQEENFWSQALEDLETCGQSGILRELEATIMSGSTLSLNHDPAPARCQLGRQASFQE
RGSNRSQYNQGNRSNTLPSDSGRKAFAMRKMQQEIKDIVSPNPVELHKVSLNKESDLEDF
GFSVSDGLLEKGVYVNNIRPGGPAEVAGLKPYDRLLQINHVRTRDFDCCLVVPLIAESGN
KLDLVISRNPASASTSPTELNQLPGEEPVGWTDPAEPLPQEAAQQNSRPVGSEGRDPNKT
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcctcggcttcgttaagcagatccgccggtcccggagacgcaaggggaaa
aagtaccggcccgaagaggattatcacgagggctacgaggacgtgtattactacgcttcc
gagcacctgcacaatgaggggccctacaccaaacactccaacccctccagatctccggat
ggagcactggccatcagaagacaaagtatcccagatgagtttaagggctccagcatggtg
gagctcatgaagaaggagggtaccaccctgggcctgaccgtttcgggaggcatcgacaag
gacggcaagccgcgcgtctccaacctgcggcaggggggcatcgcagccaggagtgatcag
ctgaacgttggagactacatcaagtcggtgaatggcatcaacctgaccaagttccgtcac
gatgagattattagtctgctgaagaacgtgggcgagagagtcgtgctggaggtggaatat
gagctgccgcctgtttccgttcaaggttcgggtgtaatgtttaaaaatgtcgaggtgacg
cttcataaagaggggaacacgtttggatttgtcatcagaggaggcgcccatgaagacagg
aacaaatctcgccctgttaccataacaacgatcagacctggtggccccgctgacagggaa
ggcaccatcaaaccaggagaccggctgctgagcatcgacggtatccgtctgcatggtaca
tcccacgcagaggcaatgagcatcctcaagcagtgcggccaggaagcaacactcctcatc
gagtttgacgtgtccatcatggactccatagccagtgcttctggtcctctcctggtggaa
gtggccaagcctctgggctccagcctgggagtggctctgtctacatccatgtactgcaac
aagcaggtcatcatcattgacaaggtcaagccagccagcatcgctgacaggtgtggggca
ctgcatgccggtgatcatatcctgtcagtagatggcacaagcatggagtattgcacgctg
gctgaagccacccagctcctagccagcgcctgtgagcatgtcaaaatggagatccttccc
catcaccagactagactggcccttaaagcctcagatcacgtcaaggtgcagaggagcaac
cggccactgccctgggagtctggcacaaacaacaacagcaacttccttccctaccagcac
tataacacctaccaccctgaccagtcccgcagccaagccaagcagaaatcttctccaaac
aacccccctctgggctcatctttctcacccacctccatgagtgcctacagcttgagttcc
ctcaacatgagcacactgcctcgcaacatgtatcccacaagcccccgcagcacactgatg
aggcgcaaactgaagaagaaggactacaagagctcgttgtctctggcctccagcactgtg
ggcctggccggacaggtggtccacacagagaccactgaggtgaccctggtcagcgactcc
atcatgggatttggaattcagctccagggaggggtgtttgccaccgaaacactcacttca
cctccactcattgcttacatagaccatgacagcccagccgagaggtgtggagtcctgcag
attggtgaccgactcctgtccatcaatgggatcccgacagaggacagcacgctggaagag
accaaccagctgctgcgtgactccagtattaccagcaaagttacgctggagattgagttt
gatgtagcagagtctgttatcccaagcagtggcacattccatgtgaagctaccgaagaag
ccaggagtggagctgggcatcaccattagctcaccatccaacaggaagccaggtgattca
ctgatcatctctgacatcaagaagggcagtgtggcgcacaggacgggcacgctggagttg
ggggacaagctcttggcaatcgacaacatccgcctggacaattgctccatggaagacgct
gtccagatcctgcagcagtgtgaggaactggtcaagctcaaaatccgtaaagatgaggac
aactcagacgagcaggagagctctggtgccatcatctacacggtggagctgaagcgctac
gggggcccgctgggcatcaccatctcaggcaccgaggagcccttcgaccccataatcatc
tccagcctcaccaagggcggcctggctgagaggaccggggcgatccatgttggggatcgt
atcctggccattaacaataacagcctgaaggggaagccgctgagtgaagctatccacttg
cttcagatggctggagaatccgttactctgaagatcaagaaacagggagaattggcaagt
cctaagcagccatcagtgactgggcatctgggtgaactgagcgatgcggaggatgagaat
cagcagaagccagggaagctgtcagacatctactccaccaccattcccagtgtggatagt
gccgttgagtcctgggacggctcggctatcgatgcctccttcatccctcaggtcccaact
ggtttccaagcatcgggctacagtttccacagtcacgagtggaggaacgccaaagtgact
cgtggcagtgtatctccaagcagcggccgtcagaggagcactgtcctgcaggacctgggc
ctcagtgatgatgaatgggacaaaccaagtgctagcgggttcaccgtggctcacgatggc
acagagccggatcaggaagagaacttttggtctcaggcgctggaggacctggagacatgc
ggccagtctgggatcctccgcgaacttgaggctaccataatgtctggcagtacactgagt
ctgaaccatgatccagcgcctgcacggtgccaactgggcaggcaggccagcttccaggaa
cgtggtagcaacaggtcacagtataaccagggcaaccgtagcaacacacttcctagtgac
agtggacgcaaagccttcgctatgaggaagatgcagcaagagatcaaggacatcgtgtcc
ccaaaccctgtggagctacacaaggtgagtctgaataaagagtcagacctggaggacttt
ggcttcagcgtgtccgatgggctcctggagaagggggtctacgtcaataacattcgccca
ggtgggcccgctgaagttgcggggctcaaaccctacgacaggctattacagatcaaccat
gtcagaactagagactttgactgctgcttggtggttcctctgatcgcggaatcggggaac
aagctggacctggtgatcagccgaaacccggcgtcagcctcaacctcgcccacagaactg
aaccagcttcctggtgaggagcctgtgggctggactgacccggccgagcccctcccacag
gaagcggcccaacagaactccaggccggtggggtcagagggcagagatcccaacaagacc
ttatag
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