Ictalurus punctatus (channel catfish): 108280002
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Entry
108280002 CDS
T04658
Symbol
vegfab
Name
(RefSeq) vascular endothelial growth factor Ab isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04370
VEGF signaling pathway
ipu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108280002 (vegfab)
04370 VEGF signaling pathway
108280002 (vegfab)
04020 Calcium signaling pathway
108280002 (vegfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108280002 (vegfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108280002 (vegfab)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108280002 (vegfab)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108280002 (vegfab)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108280002 (vegfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
B3_4
CXCXC
Motif
Other DBs
NCBI-GeneID:
108280002
NCBI-ProteinID:
XP_017350211
Ensembl:
ENSIPUG00000017388
UniProt:
A0A2D0T5V9
LinkDB
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Position
19:complement(7566084..7598917)
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AA seq
252 aa
AA seq
DB search
MSALFSETLSDAFQQVRLSYDRILNRLSRCAMSVMNLAVRLLQLFCVTLLYFSAVKSAYI
PKENGGSTNEIVAFTDVYNKSMCRPREMLVEVHQEYPDDIEHIFIPSCVVLMRCAGCCND
EMLECTPTATRNITLEVQKLKPLRIKRNYPMSFAEHTDCECRVKKDIQDRIEKKSRKGKG
KGQKGKRKKNRDKMRDFTHCKPCCSTCSERRKRLYIQDPETCQCTCKHSEADCKQKQLEL
NERTCKCDKPRR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctgttttctgagactctctctgatgcttttcaacaagtccgcctatcatac
gataggattttaaacagactttcgcgttgcgccatgtcagtcatgaacttggccgtgcgc
ttgttgcagttgttttgcgtgacgctcctgtatttctcagctgtcaagagtgcctatatc
cccaaagagaatggaggcagcacaaatgagatcgtggcctttacagatgtctacaataag
tcaatgtgtcggccacgggagatgctggtggaggtccatcaggagtatcctgatgacatt
gagcacattttcattccatcctgtgtggtgctcatgcgctgtgctggctgctgcaatgac
gagatgttagagtgcacacccactgccacacgcaacatcaccttggaggtacaaaaatta
aaacccctgcgcatcaaacgcaactatccaatgagttttgcagaacacactgattgtgaa
tgcagagtgaagaaagacattcaggataggatagagaaaaaatcccggaaaggcaagggg
aaaggtcaaaagggaaagcgaaagaaaaaccgtgacaaaatgcgggattttactcactgt
aaaccatgctgcagtacatgttctgagaggagaaaaagactatacattcaggaccctgaa
acgtgccagtgcacctgcaaacactcagaggctgactgcaagcaaaagcagctcgaactc
aatgagaggacttgcaaatgtgacaagccaagaagatga
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