Ictalurus punctatus (channel catfish): 108280060
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Entry
108280060 CDS
T04658
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108280060
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108280060
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108280060
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108280060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
FN3_Tor_3rd
PTP_tm
Ig_DSCAM-DSCAML_C
Tc-R-P
PTP-SAK
DSPc
Fn3_Dep-1_6th
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
108280060
NCBI-ProteinID:
XP_017350299
Ensembl:
ENSIPUG00000016497
UniProt:
A0A2D0T5Y3
LinkDB
All DBs
Position
19:complement(6726411..6777004)
Genome browser
AA seq
1912 aa
AA seq
DB search
MLRPEAVSVAIWVACGVMGVLLANTQQCSIKVPTDIQIHTDSIQFTLNSSDVECRFRVNI
ADMPENSIDCDQDQEMTKCKLVNLDPGTWYHLTIISKNDSNQHNVSLPTRPSVVQSVQVF
RHVDSLSVSWKPGPGRAEQFQILLRDSTGPGSAWNATLDNVTTSYMMNGLTPGRMYNMSI
VTEAAGMQNAVSMQEQTVPSMVLNAHMESNGSQTSLQVSWDQAPGDMDSYLVQLLSSDSA
VQEQTLFPNTTRAQFDQLTPGSSYQALIYTRSGDLSNQVNVTATTAPGKVSQLKMEKPAK
YGEVKISWLPPIGHWEHYSVMLFNGSETLFNKTLHKAATDFRFSPLNLQPGRVYTAAVSV
ESRGQSSIVYCRTEIGPSPVSQLHIRHADETSLSALWDHSFGSGTRDGYTVELYNATGST
AIQIRRLSRDMRECTFNVLVPGHLYKIVVTTTSGALHSSATVTGRTLPHEVTTLRLNNMG
TTDSLNASWDRPHGDLDSYQVLLLHNKETVYNLTVPANTTIIYLPHLNAGAYYKLLIITV
SGEQRSKQAEATCHTVPAAVAEVTVTNEGRPDFLNVSWRAAPGEVDSYEVNLKDHERIVY
TLTVTKLSSEFSSLVPGRLYTISISTCSGVYKNTTVVKGRTQPSAVQNPNAIHLAQENVL
KVYWNHAAGDYDHYNITIMHNNTILQNQKVEKSRNECVFSDLVPGRLYMLTLSTWSGEYE
SKTSTEGRTFPAAVRSLALAEKGTNHLCVSWKSAPGDVDHYELQILFNDTIVFPAMRLNN
TAREHCFSPLSAGFLYKIVVSTFSGLYQQAQRIEGRTAPTQVKNLQLLPGTLSGSLRASW
SAGAGDVDFYTVYLLQNVNVELTRRVPKQDNRTDFEELIPGQLYTVRVETVSGALTNDSS
VSGRTVPSPVKSLRADSEHTTHSLSVSWEAPVGVYDGYSGRLLDEDEAMVANVSVPAGIT
RYRFEGLVPGRLYTVHLKTFSNTSHSKDIVTTGKTRPAAVKGLHQLFNSTAELAFGWNAS
EGWVESYDLHLYNQDNILQDHKKVGPKNRSCIFPHLLPGTLYKLVVISRSRGLSSESSLF
ARTVPAPARDLQIDHNGHTDSVLLSWRHSPGSLDGYIVSLEGSDQPEQRLGPEHTRTIFT
NLLPGRLYTAVMRSWSGELTNTVSVVGRTVPEPPTSLTIKDVGPVGTVEVIWHAPANGDY
DDFEVKWLPQDVLQMSKPNAMRRIISGLYPGRLYNISLSTVSGGTPGPVTYSSTIYHSIR
TAPGPVQTFHCHPMSSKSLSCSWKPPASDYSAYFVECRRQGSKVPVYNYTLSANTQFQHF
ENLEPFRNYTISVTVISGNKKGAAVQNSTFTMIDRPPVPHPTVRISERAAHITKSTIFFK
FNCSWFSDTNGAIRYFAIVVAEADGAEPVLPEHRHPLPSYLDYKHNSSVLAYQTNYFQSL
CGDETDLANRVFEINLGAEMDRLGGACEQDMEHKQQGSYFCDGPLKSRTAYRLSVRAFTQ
LFDDDKREMSHPLFSDTYLSLPIWTQAEPLGGLVEGISAGLFLIGMMIVVTALLIYRQRI
RKVAVQESPLVRMNMWKEVPTSGMYTGVRSNRRLSSPIKAAHFEAHLSKLQADSNYLLSE
EFEDLKDVGRNQALDAARLPENRCKNRYNNILPYDATRVKLSCLEDDLCSDYINASFIPG
NNFRREYIATQGPLPGTKDDFWRMVWEQNVHNVVMVTQCVEKGRVKCDQYWPLDREPLYY
GDLVVHMLSESVLAEWTIREFKIFCEGQLSYPRIVRHFHYTVWPDHGVPETTQSLVQFVR
TVRDYIDRASGSGPTVVHCSAGVGRTGTFIVLDRALQQLDNRSTVDIYGCVFDLRLHRSH
MVQTESQYVYLHQCVRDVLRARKLHCEQENPLYPIYENFNPGYYRDFVYTGH
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcctgaagctgtttctgtagccatctgggtagcatgtggagttatgggtgtg
ttgctggctaatactcagcaatgtagcattaaagttcccacagacatacaaatccacact
gattctatacagttcacactgaacagctcagatgtggaatgcagattcagagtgaatatt
gcggacatgcctgagaactcgatagactgtgatcaagatcaggaaatgactaaatgtaaa
cttgtgaatttggaccctgggacctggtaccacctgactataatatcaaagaacgatagt
aatcaacacaacgtttccctaccaacaagaccttcagtggtgcaaagtgttcaggtgttt
agacacgtggatagcctgagcgtgtcctggaagccaggcccagggagagcagagcagttt
caaattctgctcagagacagcacgggtccgggctctgcctggaacgccacgttggacaat
gttacaacttcgtacatgatgaacggcctgactcctggtcgcatgtacaatatgagcatc
gtcaccgaggcagcagggatgcaaaacgctgtgtccatgcaggaacaaacagtaccaagc
atggtccttaatgcacatatggagagcaatgggagtcagacaagcctccaggtctcttgg
gatcaagctcctggtgatatggacagttacctggtccagctactgtcttctgattcagct
gtgcaggagcaaaccctgttcccaaacaccacacgagctcagtttgaccagctgacacct
ggcagctcctaccaggccttgatctacaccaggagtggtgatctcagcaaccaggtcaat
gtgactgctacaaccgctccaggcaaagtctctcagctgaagatggagaaacctgctaag
tatggtgaagtgaagattagctggctgccccctataggacactgggaacactacagcgtg
atgctctttaatggcagcgagacgctgtttaacaaaaccctacataaagctgcgacagac
ttcaggttttctccattgaatcttcaacctggcagagtttatacagcagcagtgagtgta
gagagcagggggcagagcagtattgtctactgccgcacagaaataggcccatcacctgtg
tcgcagctacatatccgtcatgcagacgagacgtccctcagtgccttatgggaccacagt
tttggctcagggactcgtgacggctacaccgtggagctttacaatgccacaggttccact
gccattcaaatacgaaggctgagccgggacatgagagagtgcacgtttaacgtgctggtg
cctggccatctgtataaaattgtcgtcacgaccaccagtggagctctccacagttctgct
acagtgacaggaaggacattgcctcatgaagtgaccaccctgaggctaaacaatatggga
accacagactctctcaatgcctcctgggacaggcctcatggagatctggactcctatcaa
gtgctgctgctacacaacaaagagactgtgtataacctcactgtcccggctaacaccacc
attatctacctcccgcatctcaatgctggagcatactataagctgctgattatcacagtc
agtggagaacaacgatccaagcaggctgaggccacctgccacacagtgccagcagctgtg
gctgaagtgacagtcacgaacgaaggacgtccagatttcctcaatgtctcatggagagct
gcaccaggagaagtggacagttatgaggtcaacctgaaagatcatgagcggattgtgtac
acgctcaccgtaaccaaactgagctctgaattcagcagtcttgtgcctggacgactgtat
accatctccattagcacctgcagtggggtttacaaaaacaccactgtggtcaaaggaaga
acacaaccgtctgcagtgcagaaccccaatgcgatccacttagcccaagaaaatgtcctg
aaggtgtactggaaccacgcagctggagattatgaccattacaacataacaatcatgcac
aacaacacaatccttcagaaccagaaagtggagaagagccggaacgagtgtgtgtttagt
gatctggtacctggtcgactctacatgctcactttgagcacctggagtggagaatacgag
tccaagacttccactgaaggacgtacatttcccgcagcagtacgctcgttggctctggcc
gagaaaggaaccaatcatttgtgtgtgagctggaagtctgcaccaggggatgtggatcac
tacgagctccaaatcctcttcaacgacacaatagttttcccagccatgagacttaacaac
acagcacgagagcactgcttctctccgctcagcgccggctttctctacaagatagtggtc
tccaccttcagcgggttgtaccaacaggcccagcgcatagagggccgcaccgcacccact
caggtgaagaacctccagctcctccctgggacactcagtggcagtctcagggcttcctgg
agcgctggtgcaggagatgtggacttctacacggtctacctgctccagaacgtaaatgtc
gagctcacccgacgtgtccctaagcaggacaacaggacagactttgaagagctcatcccc
gggcagttgtacactgttagagtagagacagtgagtggagcattgactaatgacagcagc
gtcagcggacgtacagttccttcgccggtgaagagcctccgggccgacagtgaacacacc
acacacagtctgtctgttagctgggaagcgccggtgggtgtgtatgatggctacagtggt
cggctgttggacgaggacgaagccatggtagccaatgtttcagtgcctgcaggcatcaca
cgttaccgctttgagggtttggtcccaggaagattgtacactgtgcatcttaagaccttc
agcaacacttctcacagcaaggacattgtaacaacagggaaaacacgcccagcagctgtg
aaaggtctccatcagcttttcaacagcaccgctgagctggcgttcggctggaatgcatca
gaaggctgggtggaaagttacgacctccacctgtacaaccaggacaatattctccaagac
cacaagaaagtgggaccaaaaaacagaagctgcattttccctcacctgcttcctgggaca
ctttacaaactagtggtgataagcaggagcagaggactgagcagtgagtcttctctgttt
gcgcgcacagtgcctgccccagctcgagacttgcagattgatcataacggccacaccgac
agtgtgttgctgagctggagacattctcctgggagtctagacggatatatcgtttctctg
gagggctcggatcagccagaacagagactgggacccgaacacactcgcacaatcttcaca
aaccttctgcctggtcgcttatacactgctgtgatgcgcagctggagtggagaacttaca
aacactgtctctgtagtagggcgcacagttcctgagccacccacatcactgaccattaaa
gatgttggccccgttggcacggtagaggtgatatggcacgctcctgctaatggggactat
gatgactttgaagtaaaatggctgcctcaagatgtgctgcagatgtccaaaccaaacgca
atgcgacgcatcatctctggtctgtaccctggccggctgtataacatcagcctgtccact
gtgagcgggggaacaccagggcctgttacctacagctcaactatttaccactccatccgc
acagctccaggaccagtccagaccttccactgtcatcccatgagctctaagtctctctcg
tgctcctggaagcctccagcatctgattacagcgcttactttgtggaatgcaggaggcaa
ggctccaaagtgcctgtgtacaattacacactgagtgctaatacccagtttcagcacttc
gaaaacttagagcctttcaggaactacacaatctcggttacagtgatctctggaaacaag
aaaggtgcagccgtccagaacagcaccttcaccatgatcgaccggccgccggtgcctcac
cccacagtacgcatcagtgagagagcagcccacataaccaagtccaccattttcttcaag
ttcaactgtagctggttcagcgacaccaacggggccattcgttactttgccattgttgta
gccgaggctgacggtgcggagcctgtgttgccagaacacaggcatcctctgccctcttac
ctggactacaagcacaacagctcagtattggcttaccagaccaactactttcagagtctg
tgtggagatgagacggatttggccaaccgggtgtttgagatcaacctcggggccgagatg
gaccgtctgggaggagcttgtgagcaagacatggagcacaaacagcaggggagctatttc
tgtgatggacccttaaaatccagaacagcctataggctcagtgttcgagccttcactcag
ctctttgatgatgacaagagggagatgtctcatcctttgttcagtgacacatacctctca
ctcccgatctggacacaagcagagccgctgggaggactcgtcgagggcatcagcgctggc
ctgtttctcattgggatgatgatcgttgtaactgccttactgatctacaggcagaggatc
cgcaaagtagcggtgcaggaaagccctctggtgaggatgaatatgtggaaggaggtgccc
acctcagggatgtacacaggggtcaggagcaaccgccgcctatccagccccatcaaagca
gctcactttgaagctcatctcagtaaacttcaagcagactccaattacctcctctcggag
gagttcgaggatctcaaggatgtgggacggaatcaggctttggatgctgcgcgtttaccc
gagaaccgatgcaagaaccgatacaacaatatactgccatatgacgcgacccgtgtgaag
ctctcatgcttagaggacgacctatgctctgactacatcaatgccagcttcatccccggc
aataatttcaggcgagagtacatcgccacgcaggggccactcccaggcaccaaggatgat
ttctggcgcatggtgtgggagcaaaatgtgcacaacgtcgtcatggtgacgcagtgcgtt
gagaagggcagggtgaagtgtgatcagtactggcctttggacagggagccgttgtactac
ggtgacctcgtggtccacatgctctccgagtccgtcctagcagaatggacaatccgcgag
ttcaagatattctgcgaaggccagttgagttatccgagaattgtacgtcacttccattac
acggtgtggccggatcacggcgtgcctgagaccacccagtcgctcgttcagttcgtgaga
actgtgagagattacatcgacagggcgtcaggctcgggccctacagtggtccactgcagt
gctggtgtgggccgtacaggcactttcatcgtgctcgatcgtgctttacagcagctggac
aaccgcagcacagtcgatatttacggctgtgtgttcgacctgcggctgcaccgctcgcac
atggttcaaaccgagagccagtatgtgtacctccatcagtgtgtgcgtgatgttctgaga
gccaggaagcttcactgtgaacaggagaacccactttaccccatttatgaaaactttaac
cctggctactatagagattttgtgtacactggacattga
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