Ictalurus punctatus (channel catfish): 108280081
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Entry
108280081 CDS
T04658
Name
(RefSeq) rab-3A-interacting protein isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108280081
03036 Chromosome and associated proteins [BR:
ipu03036
]
108280081
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108280081
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108280081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
fvmX5
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
108280081
NCBI-ProteinID:
XP_017350338
Ensembl:
ENSIPUG00000016232
UniProt:
A0A2D0T623
LinkDB
All DBs
Position
19:6553672..6585427
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AA seq
436 aa
AA seq
DB search
MASEPLEGFHEVNLASPTTPDLHGINEPHAPKPSAPPSTLYRTHSLTSNPCPPNALYVDQ
LPTQPVYPAPRDLDNDEPHNGSLPGLEGSASQEGGPGDGSALLGEEGEDPLSLSTDSLSR
LRSPSVMEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEA
HKMVREANVKQATAEKQLKEALGKIDVLQAEVAALKTLVLSTSPTSPCKELPSGSKVPFK
KGHVRNKSTSSAMLGSQQELSVTQPIVRDCKEVDSILFNEFKAWKEEPTFERSCSFLDRI
YREDIYPCLTFCKSELGSAILEAVERNTLSVEPVGFQPLPVVKASAVECGGPKKCALSGQ
TKTCKHRIKFGDSSNYYYVSPFCRYRITSVCNFFTYIRYIHQGLVKQQDAEQMFWEVMQL
RKEMSYAKLGYFRDEL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaacccctcgaaggtttccacgaggtgaacctggcatcacccaccaccccg
gacttgcacggcatcaacgagccacacgctccgaagcccagcgcaccacccagtacgctg
taccgtacacactccctgacctctaacccctgtcctcctaatgctctctatgtcgaccag
ttacccacccagccagtttaccctgctcccagagacctggacaacgatgagccgcacaat
ggcagcttgcctggactggagggctcagcctcacaggagggagggccaggtgatgggagc
gccttattgggcgaagagggagaagatcccttgagcctgagcacagacagcctatcacga
ctcagaagcccttctgtgatggaagtcagagaaaaaggatacgagcggctgaaggaagag
ctcgccaaagctcagagggagcttaagttaaaagacgaggagtgtgagagactttctaaa
gtcagggaccagctggggcaggagctggaggaactcactgctagcctgtttgaggaggct
cataagatggtgcgagaagcgaacgtgaagcaggccacagcagagaagcagctgaaggaa
gccctcgggaagattgatgttctccaggccgaggtggctgcactgaagacactcgttctg
tccacgtctcctacgtcaccatgtaaggagctgccatctggctccaaggtgccatttaag
aaaggccacgtgcgaaacaagagcaccagtagtgcaatgctgggcagccagcaggagctt
agtgttactcagcccattgtacgtgactgcaaggaggtggactccattctgtttaatgag
tttaaggcatggaaggaggaacccacgtttgagcggagttgctctttcttggaccgaatc
tacagagaggacatttatccatgtctcacgttctgcaagagtgagctgggctcagcgatc
ttagaggctgtggagagaaacacactgagtgtggagccagtgggattccagccgctgcca
gtagtcaaagcctcagctgtggagtgtggagggcccaaaaaatgcgccctcagtggccag
actaaaacctgcaagcacagaatcaaattcggggactccagcaactactattacgtgtct
ccattctgtcggtatcggatcacctccgtctgtaacttctttacctacattcgctacatc
caccaaggactggtcaagcagcaggacgctgaacagatgttctgggaggtcatgcagctg
cggaaggagatgtcatacgccaagctgggctacttcagagatgaactgtga
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