Ictalurus punctatus (channel catfish): 108280089
Help
Entry
108280089 CDS
T04658
Name
(RefSeq) ras-related protein Rab-21
KO
K07890
Ras-related protein Rab-21
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108280089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108280089
04031 GTP-binding proteins [BR:
ipu04031
]
108280089
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108280089
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108280089
Exosomal proteins of other body fluids (saliva and urine)
108280089
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab20/21/24 [OT]
108280089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
MMR_HSR1
ATP_bind_1
TRAPPC-Trs85
DUF2093
Motif
Other DBs
NCBI-GeneID:
108280089
NCBI-ProteinID:
XP_017350352
Ensembl:
ENSIPUG00000016721
UniProt:
W5URF0
LinkDB
All DBs
Position
19:complement(6985264..7000791)
Genome browser
AA seq
220 aa
AA seq
DB search
MAAAGATTAHRTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITG
KRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEI
CLCIVGNKIDLEKERHVSVEEAEAYAESVGAKHYHTSAKLNKGIEEMFLDLCKRMMETAQ
VEERSKGNGTSHASTGRRGVQIIDDEPQAATAAGGCCSSG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctggcgccactactgctcacagaacatactccttcaaggtggtgttgtta
ggggaaggctgcgtgggcaagacctccctggtcctccgctactgtgagaacaagttcaac
gacaaacacatcacgaccctccaggcatcgttccttacaaagaagctcaacatcacgggc
aagagagtcaatctggctatttgggacacagctgggcaggaacggttccacgctctcggc
ccaatctactacagagactccaacggagccattttagtctacgatattaccgatgaagac
tctttccagaaggtgaaaaactgggtgaaggaattaaggaaaatgttgggaaacgaaata
tgtttatgtatagtaggtaataaaatcgatctggaaaaagagagacatgtttcagtggaa
gaggctgaggcgtacgcggagtcagttggggcaaaacactaccacacgtcagctaaatta
aacaaaggaattgaagaaatgttcctcgacctgtgtaaaagaatgatggagacggcacag
gtggaggagagatccaaggggaacgggacaagccacgcaagcacgggacgaagaggcgtt
cagatcatcgatgatgaaccacaagctgctactgcagccggagggtgctgttcttcaggc
tag
DBGET
integrated database retrieval system
