Ictalurus punctatus (channel catfish): 108280143
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Entry
108280143 CDS
T04658
Name
(RefSeq) 39S ribosomal protein S18a, mitochondrial isoform X1
KO
K02963
small subunit ribosomal protein S18
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108280143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ipu03011
]
108280143
Ribosome [BR:
ipu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
108280143
Bacteria
108280143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S18
Motif
Other DBs
NCBI-GeneID:
108280143
NCBI-ProteinID:
XP_017350409
Ensembl:
ENSIPUG00000017406
UniProt:
A0A2D0T688
LinkDB
All DBs
Position
19:7708844..7715998
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AA seq
208 aa
AA seq
DB search
MAALCVMKSVRTALSAVHCAINNSLIPRLLNGPQLSFFGCTSSRGIRQVVEKQEGKTTVI
EGLTVAAPESPQPPNPTAKCPIYRWNLQNKYTYTDVLLLSQFIRSDGGMLPRRITGLCAQ
EHRKIAICVQMAHRAGLLPDHRPHLPEGHVPKPKPNPPLNRYLTRYSVKSVKPIYRKGMK
WCKIRMPVGHPALKDNIRYSPKPLYTKH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctctgtgtgatgaagtctgtaaggacagcgctcagtgccgtccactgtgct
atcaacaacagtttaataccgaggttattaaatggaccccagctgtcgtttttcggctgc
acgtcgagtcgtggtatccggcaagtggtggagaagcaggaggggaaaactacagtgatt
gagggtctgacagtggctgcacccgagagtccgcaacctcctaacccaaccgctaaatgt
ccgatttaccgatggaacctccagaacaagtacacatacacagatgttttactactgagt
cagttcattcgttcagatggagggatgttgccaagacgcatcactggcctctgtgctcag
gaacatcgcaagatcgccatatgtgtgcagatggcccatcgagcaggtctcctcccagac
cacagaccacatcttcctgaaggccacgtaccaaagcccaaacccaacccgccactcaac
aggtacctgactcgttactctgtgaaatcggtgaagcccatctacaggaaagggatgaag
tggtgtaagattcgtatgcctgtgggacatccagctctcaaggacaacatcagatacagc
cctaagccactgtacacaaaacactga
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