Ictalurus punctatus (channel catfish): 108280170
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Entry
108280170 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108280170
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108280170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
Med2
zf-LITAF-like
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108280170
NCBI-ProteinID:
XP_017350465
Ensembl:
ENSIPUG00000005387
UniProt:
W5UJD5
LinkDB
All DBs
Position
20:4890778..4895905
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AA seq
422 aa
AA seq
DB search
MENLEEDLTCSVCYSLFNDPRVLPCSHTFCKACLENVLQVSTNFSIWRPLRLPLKCPNCR
SMVELPPNGVEALPINVCLRAIIEKYQHDNEPRAPSCPEHHRQPLNVYCVQDCKLICGLC
LTIGQHQGHTIDDLQTAYVKERNTPARLLERLTDGRWEEVCGLVEKLEQEKSRHEGLIRK
DREAVTQFFQGLERLLEHKKEAFMKVLDRANGQLACAYKPLIEKLKDLKEEQLELVSIVS
SISEDESALVFLEKVNHLRERVDALTQAELPEVPTLHISPCLEEFLEEHWVNVTIGRLED
GPVPKISCHVKRHCDKEAQSELAQKRTFKSWTVMAFLTVLLFLLLFWLNPVSGESLGFSN
LSHITQAVVSLAHELTLLLHDSGTFLYGLLHDLNLKFSAYISAVGERTYQRVAFFLKTLQ
LC
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttggaggaggacttgacgtgctcggtttgttattccctctttaacgatcca
cgagtactcccctgctcccacaccttctgcaaagcatgtctggagaacgtgctccaggtc
tccactaacttctccatctggcgcccgcttcgcctaccactgaagtgtcccaactgccgt
agcatggtggaacttccccctaatggcgtggaagctctgccgattaatgtctgtctgcgc
gccatcatagaaaagtaccagcatgacaatgagccgcgagctccttcctgccccgagcac
catcgccagcctctgaacgtctactgcgttcaggactgcaagcttatatgcggcttgtgc
ctcactatcgggcagcatcagggccacaccattgatgatctgcagacagcgtacgtcaaa
gagcgcaatacccctgccagactgctcgagcggctcacggacgggcgctgggaagaagtc
tgtggcctggtggagaagttagaacaggaaaaatctcgacatgaaggtctaataaggaaa
gaccgtgaagctgttacgcagttctttcagggcctggagcgccttcttgagcacaagaaa
gaggcattcatgaaagttctggacagggccaacgggcagctggcctgcgcttataagcca
cttatcgagaagcttaaggatcttaaggaggagcagctagagctcgtctctatcgtctca
agcatcagtgaagacgagtcagcccttgttttcctggagaaggtgaaccacttgagggag
agggttgatgccttgacccaggcagagctgcccgaagtccccaccctccacatctcaccc
tgtttagaggagttcctcgaggaacactgggttaacgtgacgattggaaggctggaagat
ggtcctgttccaaaaatctcctgtcacgtgaagagacattgtgacaaagaggcacagtca
gaattagctcagaagcggacgttcaagtcttggaccgtcatggcttttctaacggtgctg
ctgttccttctgcttttctggttaaatccagtgagtggagaatcacttggattctctaat
ctctcccacattactcaagcagtagtgagtctagctcatgaactaactttattacttcat
gattcggggacatttctgtacggcctgcttcatgatcttaaccttaaattcagtgcgtat
atttcagctgtcggggagcgcacctatcaacgtgtggccttctttttaaaaacattacag
ttatgctaa
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