Ictalurus punctatus (channel catfish): 108280197
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Entry
108280197 CDS
T04658
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280197
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108280197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
HAUS1
AcrF31
Spc25_N_drosophila
Motif
Other DBs
NCBI-GeneID:
108280197
NCBI-ProteinID:
XP_017350510
Ensembl:
ENSIPUG00000006007
UniProt:
A0A2D0T790
LinkDB
All DBs
Position
20:5681703..5689497
Genome browser
AA seq
299 aa
AA seq
DB search
MEELTAFVSKSFDQKVKEKKEAITYREVLETGSARAREALPVEAGREDASILARGAVARS
PVREADMTGPERTRDTGSPKLTDGILDVKERKEDAKPTEDETQTKIKQRRSRTNFTLEQL
NELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAAS
QFEACRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHAHHHLHSHLAAHA
PYMMFPAPPFGLPLATLAAESASAASVVAAAAAAKNSNKNSSIADLRLKAKKHAAALGL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactcaccgcattcgtgtccaaatcctttgatcagaaagtgaaagagaagaaa
gaggcgatcacgtaccgggaagtgctggagacgggctcggcgcgagccagggaagcgctc
ccggttgaagcagggcgcgaggacgcgagcattctagcgcgaggagccgtcgcgcgctca
ccggtcagagaagcggacatgacggggccggagaggacgagggacacggggagtcccaaa
cttacagacggcatcctggacgtgaaagaacgaaaagaggacgccaagccgacagaggac
gagacgcagaccaaaattaagcagaggagaagtcggactaactttactctggagcagctg
aacgagttggagaggctgttcgacgagacgcactatccggacgcgttcatgcgcgaggag
ctgagtcagcggctcgggctctccgaagcgcgcgtgcaggtttggtttcaaaacaggaga
gccaagtgcagaaaacaggagaaccagttacacaaaggggtgctcatcggagctgcgagt
caatttgaagcgtgccgcgtcgcgccatatgtcaacgtgggagctttgcgcatgccattc
caacaggatagtcattgcaacgtgccacccttctcctttcaggtgcaggcgcagctgcag
ctggacagcgccgtggcccacgcgcaccatcacctgcactctcacctggcggcgcatgcg
ccctacatgatgttccccgcgccgccgtttggcttgcccttggccacgctggcggcggag
tctgcttcagcggcgtcggtggtggccgcagccgccgccgccaagaacagcaacaagaac
tcgagcatcgcggacctgagactgaaggccaaaaagcacgcggcggcgctcgggctgtga
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