Ictalurus punctatus (channel catfish): 108280210
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Entry
108280210 CDS
T04658
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108280210
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
108280210
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Gly_rich_2
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
108280210
NCBI-ProteinID:
XP_017350526
Ensembl:
ENSIPUG00000017853
UniProt:
A0A2D0T6R7
LinkDB
All DBs
Position
20:17787899..17867123
Genome browser
AA seq
1102 aa
AA seq
DB search
MDRNELSPGSGAVAQKPALVSGCGAPSSHCASRCDTRLSNQCGPTKHDIMDKAEDSEEGP
NFQHPRLRRAGATGGGGGGGAGGNTKMQNFASGGGAALKSSPNDEIPAVQDTSELEQVEV
VAPTGAAAAARTFAPARLSDAAAHDDPDPGKSSPLALTVDACNVPAEGGGHGAAPISAMK
CNKNGECRRGSGTGSLRSIMSKQDKQDANKRATSSSTSVTDAPAAPTGPGDSSSPAAVPD
KKDSRVSFSNAPSRKTSASMQSQQPRNSVTFLKSEDGAQIASEDAETRGSQASFMQRQFS
SMLQPGVNKFSLRMYGSQKGVEREQERVKSAGKWIIHPYSDFRFYWDFTMLLFMVGNLII
IPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLK
TWFVVDFVSSIPVDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIH
QWEEIFHMTYDLASAVMRIINLIAMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVND
TWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQS
LDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLRE
EIVNFNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPRDYIIREGTIGKKMYFIQHGV
VNVLTKGTLGMKLSDGSYFGEICLLTRGRRTASVQAETYCRLYSLSVDNFNEVLEEYPMM
RRAFETVAIDRLDRLGKKNSILMHKVQHDLNSGAFNNRENEMIQEIVKYDREMVKLVDFQ
RPRAMSMTAAVPGGIFAPPGQSQGTSAIATLQQAVAMSFCPQMVNPLVGTGTLQSPRMVR
RFQVIQNISSPASVSPMQPQPPGPMPGGACASAATSSPPVQSPLAPTCSRTFQYGCSPMG
GRTGSQLSLVQQHVPSPTRKGAHSLQHAESLSQDARSLSTSQPSLPQDGVTGVGTSPPPS
AHVSSTSIGPQHAPHPAIPGPSGIRSSVPHRIVQPHQMSPPTPPPVAGAGPSYLEPIVHK
KDSIVSLPETDSTIRSRLSSNL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaatgagctttcccccgggtctggagctgtcgcgcaaaaacctgcgctcgtg
agcggttgtggcgcaccttcgtctcattgcgcaagccgctgcgacaccagactgtccaac
cagtgcggtccgaccaagcacgacattatggacaaggcggaggacagtgaagaagggccc
aactttcagcaccctcgacttaggcgagctggtgccaccggaggtggtggaggaggagga
gcaggaggcaacactaagatgcaaaactttgcgtcgggaggaggagccgcgcttaagagc
tcccccaacgacgagatcccggcggtccaggacacttcagagctcgagcaagtggaagta
gtcgctcccacgggcgcagccgcagcagctaggacgttcgcgcctgcgcgtctgagtgat
gcggcggcacacgacgaccccgatcctgggaaatcgtctcctctagcgctcacggtagac
gcctgtaatgttccggcagaaggaggtggccacggcgcagctccgatttccgcaatgaag
tgcaacaaaaacggcgagtgcaggagaggctcaggcacgggcagtttgcgctccattatg
tccaagcaggacaagcaggatgcgaataaacgcgccacgagctcctcaacttcagtcaca
gacgcgcccgctgctcccacgggccctggagactcctccagtcccgccgccgtcccggac
aaaaaggactccagggtgtcgttttccaatgcaccgagtcggaaaacatccgcttccatg
cagagccagcagcccaggaactccgtgacgttcctcaaatccgaggacggagcacagatc
gcatccgaagatgctgagacgcgcgggagccaagcgagcttcatgcagaggcagttcagc
agcatgctgcagccgggggttaacaaattctctctacgaatgtacggcagccagaaaggg
gtggagagagagcaggagcgcgtcaagtcagctggaaagtggatcattcacccttacagc
gacttcaggttctactgggactttacaatgcttctcttcatggtgggcaacctgatcatc
attccagtaggcatcacgttcttcaaggaggagaccaccacgccttggatcatcttcaac
gttgtctccgacacgttcttcctaatggacttggtgctcaacttccgcacgggcatcatc
atcgaagacaactccgacatcatcctggatcccaagaccataaagaaaaagtacctgaag
acatggtttgtggtggactttgtctcgtccatccccgtggattacatctttctcattgtg
gagaagggaatagactcggagatgtacaagacagcgcgggccctgcgcatcgtgcgcttc
acgaagatcctcagtttgctgaggctgctgagactctcccggctcatccgctacatacac
caatgggaggagattttccacatgacctatgacctggcgagtgccgtgatgcgcatcatc
aacctgattgctatgatgctactgctctgccactgggatggatgtcttcagttcctcgtg
cccatgctgcaggacttcccctccgactgctgggtctcgctcaacaaaatggtgaatgac
acatggagtgagctgtactcctttgctgtgtttaaggcgatgagtcacatgctgtgtata
ggttacggccgccaggctccagagagtttgtctgatatatggctgaccatgctcagcatg
atcgtaggagccacctgctacgccgtcttcatcggccacgccaccgctctcatccagtca
ctggactcctctcgtcgacaataccaggaaaagtacaagcaagtggagcagtacatgtcc
ttccacaaacttccagcagatttccggcaaaaaatccatgactactacgagcaccgctac
cagggcaagatgttcgatgaggagagcatcctggaggagctgaacgaaccgctcagagag
gaaattgtgaacttcaactgccgtaagctggtggcctcgatgcctctgtttgccaatgct
gagcccaactttgtcacggccatgctaactaagctccgcttcgaggtcttccagccccgg
gattacatcatccgcgaaggcaccattggcaaaaagatgtacttcatccaacatggcgtg
gtcaatgtcctcaccaaaggaactctgggaatgaagctgtccgatggctcctattttgga
gaaatctgtttgctaacacgagggcgccggacagcgagtgttcaggcggagacatactgc
cgtctttactcactctccgtggacaacttcaatgaggttctggaagagtaccctatgatg
agaagagctttcgagactgtagccattgacagactcgatcgtctaggtaagaagaactcc
atcttgatgcacaaagtgcaacatgacctcaactccggtgccttcaacaacagagagaat
gaaatgatccaggagattgtgaagtatgaccgagagatggtcaaactagtggactttcag
cgtccacgtgccatgtctatgacggccgcagtccctggtggcatatttgccccaccgggc
cagtcacagggcacctcagccatcgccaccctacagcaggctgtagccatgagcttctgc
ccacagatggtgaatcctctggtgggcacaggcactcttcaatctccccgcatggtccgg
cgcttccaggtaatccagaacatttccagccctgcatctgtctctcccatgcagccacag
ccaccagggccaatgccagggggtgcgtgtgcttctgctgccacatccagtccacctgtg
cagagccccttggcaccaacgtgctcaaggacattccagtatggctgcagccccatgggt
gggcgtacaggatctcagctgtctcttgtccaacagcatgtgcccagtccaacgcgcaag
ggtgcccactccctgcagcatgcagagagcctgagtcaagatgcccgttcattgtctact
tcccagccttctttgccccaggatggagtgacaggtgtgggtaccagcccaccaccctca
gcccacgtctcctccacgtccattgggccacagcatgcccctcaccctgcaatacctggg
ccctctggaatcagaagctctgtacctcatagaattgtacagcctcaccagatgtcaccc
cccacaccgccccctgttgctggagcagggccaagctatctcgagccaatagtgcacaag
aaagattctatagttagccttcctgagacggactccactatcagatccaggctgtcctcg
aacctctga
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