Ictalurus punctatus (channel catfish): 108280338
Help
Entry
108280338 CDS
T04658
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280338 (zeb1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
108280338 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
108280338
NCBI-ProteinID:
XP_017350695
Ensembl:
ENSIPUG00000015972
UniProt:
W5UGB4
LinkDB
All DBs
Position
20:complement(11041732..11094268)
Genome browser
AA seq
1250 aa
AA seq
DB search
MADGPRCLRRKQTKPRRTNVKSFSTVSEAASDSDDEDKLHIVEEDSIADTSEEKPSVFQL
GAAQQLHKGHTLNDGNLGPDALIQEIRVKEECVTDEEDEGGQMNETPWQGKKGVICPDIP
EEEQGTPERGVHDENGTPDDFSQLHSCPYCSRGYKRHTSLKEHIKLRHEKSKDDFSCSLC
SYTFTYRTQLDRHMNAHKNGREQKMVSHLGGNRKFKCTECSKAFKYKHHLKEHLRIHSGE
KPYECSNCKKRFSHSGSYSSHISSKKCVSISPAVNGLSHTPGVKAAHTLIHPTRILLREK
VDIDNKPLEEQLPPKKIKEEPDEHELKPVRTTSVVTTTAINTTSTTNKGGGISIQSAAPQ
GVVQTLVLPTVGLVQPISINLRDLQNTLKVAVDGNMVWQAVPSSNANGASSKVVNQGQPQ
AVLVQSPHPHLQVISAISLPVLDQDGNSKIIINYSVDPQISTSDLNAAQSALRHQTLAQA
KVLEPNMAPPEVVKLNSTQTTKVAQTNTTQSNVTPTQKPPTSRPVPAQRSILKSTESAAQ
NKTASIIKVTKLVPGKTKHTQPALLLLRTTNGSQGLVVRQLAAVNPQVTPAVGTTDLKST
PECTIMAAEHNSLIELNQVAEETNTSRDSCQPEDLRSTLLQGNQFKTETEIKADCEEALQ
IEREKERERKEGMTAQSDSTTAHRSVVCDDGFHNYATCLFCDNSPSSTDNLNCLNSNEQG
PDRSLSSLLGDEDFGSVDQPPMKSLLPLLEAYSKDSHPSEEQLSQVAVSVSLPVDVVSRW
FQRMRLKNILLHHPENRQNGQQTIANSQPEPSMDAQTQILDVPTEPHNEESVGQHRDPPS
LNLSTNDIDIIIKTEDVEEKGQAEPLDLSLPKSSCCNGNTSVTIAVSATKPSIPTQEEPL
NLTCFKKDTLDGNTIYVTQSATSPINIIATPLPTLVAIAEPGGIPCLRAAISTKQHTILI
PQLSYTYTSPSTNSKANLTTSFSNKASTITTIPSTDTQGTVLDGCQKEKTDAGDESMSRC
EGLNDCNLSPNKKRRKMHGGQYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGVCKKAFK
HKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEGYDQPETNNASST
PPSQLDSDERESEVEEEIDDDDDDDDDEEPEGEKDGEDFSGFDMSDIRVVRVGEEYDEEE
EEVGRGGKKQVTEEDPVELDTLEKEVVKILGMQDMMDSKTKEEMGKTSGE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgcctgcgtagaaagcagacgaaaccgaggagaactaatgtg
aaaagtttctcaactgtgtcagaagcagcttcagattctgatgatgaagataaactccac
attgtggaagaagacagtattgctgacacttcagaggaaaagccgtcagtattccagctc
ggtgcagcacagcagctacacaagggacatacattgaatgatggcaacctggggccagat
gctttgatacaggaaataagggtgaaagaggaatgtgtaactgatgaagaggatgaagga
ggtcagatgaatgaaaccccatggcagggaaagaaaggggtcatttgtccagacattcca
gaggaggaacagggcacgccagaaagaggtgtccatgatgagaacggtacacctgatgat
ttctctcagctccactcatgtccatactgttcccgaggttacaagcgtcacacatcgctg
aaggagcacatcaagctgcgtcatgaaaaaagcaaggatgacttcagttgctctctctgc
agctacactttcacctatcgcacacagcttgaccgacacatgaacgctcacaaaaatgga
agagagcagaagatggtttcacatttgggaggaaacagaaagttcaaatgtacagagtgt
tctaaagcctttaagtataaacatcacctgaaggaacacctacgcatccacagtggagag
aagccatatgagtgctcaaactgtaagaagcgcttctcccactctggctcctacagttct
catatcagcagtaagaagtgtgtatcaatttcccctgctgttaatggcttgtctcacact
cctggagtcaaagcagcccataccctgattcaccctacacgtatcctcttgcgggagaaa
gttgacattgataacaaacctttagaggaacagcttcctcctaagaagattaaagaagag
cctgatgagcatgaacttaaacctgtcagaactacatcggttgttactacaaccgctatc
aacactaccagcactactaataaaggaggtggaatttctattcagtctgctgctcctcag
ggtgtagtacagacactagttttacctactgtgggtctagttcagccaataagcatcaac
ctacgagacctccagaacacgttgaaagtggcagtggatggaaacatggtgtggcaggct
gtgcctagctcaaatgctaatggagctagtagtaaggttgttaatcaagggcagccacaa
gcagtgcttgtgcagtctccccatccccatttgcaggtgatttctgcaatctctctccct
gtgctggatcaggatggaaattccaaaattatcataaactatagtgtagacccacaaatt
agcacatcagatttgaacgcagcacagtcagcattgcgacatcaaactttggcccaagca
aaagttctagagccaaatatggcaccaccagaagtggtaaagttgaattcaacacaaact
acaaaggtggcacaaactaacacgacacagtctaatgtcactccaacccaaaaaccaccc
acctctagaccagtacctgcacaaagaagtatacttaaatccacagagtcagctgctcag
aataaaacagcatccataataaaagtcacaaagctggtcccaggaaagacaaagcataca
cagccagcattgttgcttctaagaacaaccaatgggtctcagggcctggtggtgagacag
ttagcagcggtgaacccacaagtaactccagctgtaggaactacagatctgaaatcaacc
ccagaatgtaccatcatggcagcagaacacaattcactcattgagctgaaccaggttgca
gaagagaccaatacctctagggacagctgccagcctgaagacctgaggtcaactttgcta
cagggaaatcagttcaaaactgagactgagattaaggcagattgtgaagaagctttacag
atagagagagaaaaggagagagaaaggaaagagggaatgactgcacaaagtgattcaaca
acagctcacagaagtgttgtttgtgatgatggcttccataactacgctacatgtcttttt
tgtgacaacagccccagcagcactgataacctgaattgtctcaacagcaatgaacaagga
cctgacaggtctctctcttctctgctgggggatgaagactttggaagtgtagatcagcca
cctatgaagagtcttttgcccctccttgaggcatacagcaaagactcacaccccagtgaa
gagcagctgtctcaagttgctgtatcagtcagtttgcctgtggatgtggtcagtcggtgg
tttcaaagaatgcgcttaaagaacatattactacaccaccctgaaaatcgccaaaatggg
caacagactattgcaaactctcaaccagagcccagtatggacgcccagacccaaatcctg
gacgttccaactgaaccacacaatgaggaatcggtgggccagcacagagaccctccttct
ctaaacctctctacaaatgatattgatatcatcataaagacggaggatgtggaagagaaa
gggcaagccgaacctttggatctctcactcccaaagtcctcttgttgtaatggtaacacc
tctgtcaccattgcggtgtctgccaccaagccatctatccccacccaagaggaaccgctc
aatctgacatgtttcaagaaggacacattggatggcaacaccatttatgtgacacagtca
gccacaagtccgataaacatcatagccacacctttgccaactctggttgccattgcagag
cctggtggaattccctgcctaagagctgccatctccaccaaacagcacaccatcctcatc
ccccagctgtcctacacatatacttccccttccaccaacagcaaggctaacctcaccact
tccttcagcaacaaggctagcaccatcaccacaataccatcaacagacacacagggaaca
gtactcgatggctgtcagaaggagaagactgatgctggagatgaatccatgtccaggtgc
gaggggctgaatgactgcaacctttcccccaacaagaagaggaggaagatgcatggtggc
cagtatgcatgtgacctatgtgacaagattttccagaagagcagctctttactacgtcac
aaatatgaacatacaggtaaacgtcctcatgagtgtggagtctgtaagaaggcatttaaa
cacaagcaccacctaatcgagcactcacgtctacactctggagagaaaccataccagtgt
gataaatgtggcaaacgcttctcacactccggctcttactcccaacacatgaaccatcgc
tactcctactgcaagaaggaaggttatgaccagccagagacaaataatgcttcatccaca
cctccctcacagcttgactcagatgagagggagagcgaagttgaagaggagatagatgat
gatgatgatgatgatgatgatgaagaaccagaaggagaaaaagatggtgaagatttttct
ggctttgacatgagtgacataagagtggtcagggttggtgaggaatatgatgaagaagag
gaggaagtggggagaggagggaaaaaacaggtgacagaagaggacccagtggagttggat
actctggaaaaggaagtggtgaagattttgggcatgcaagacatgatggacagcaaaaca
aaggaggaaatggggaaaaccagtggagaatga
DBGET
integrated database retrieval system
