Ictalurus punctatus (channel catfish): 108280402
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Entry
108280402 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108280402
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108280402
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108280402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
zf-RING_2
zf-RING_11
VPS18_RING_C
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108280402
NCBI-ProteinID:
XP_017350829
Ensembl:
ENSIPUG00000007223
UniProt:
A0A2D0T7H2
LinkDB
All DBs
Position
2:complement(39568150..39579194)
Genome browser
AA seq
495 aa
AA seq
DB search
MAAESDVQCEIEVLESIYLDELTVTRNDDGGWRVSVILHPSTGEDCLAQFVRLTLTLDLD
SEYPASPPCISIHHPRGLSDDKLLSLQRSLHSEAEECVGTPVLYQLIEKAKEILTESNIP
HGSCVICLYGFKEDEVFTKTSCYHYFHSHCLGRYITHSEEELKERVRELEEDKTRDGGED
EELCVVCPVCREPLMYDVNALLSSPVPKFPQQEDEAVTAEFKRKWAELQKILERQREKGG
VIDPEAESNRFLIHINHTLTDSSDPACVHAPDTDSTQQLSPPPPPPPPECSNQNPQPLRA
ENRPCPSHRRAPHAPHGRRTQVEFRGGRRDRGKGGGGRGGHAVSPPVLENLAKLSMSAAE
SSRNSGAAQDTSEHGDGLLAEAKEQPRQALGDESVAMSREEMNESKHERHVTSGGAQTGA
RERGTRQDRDRGRRHGPRGPPYSHWHERNAQWDNGGNVHHHHHRGTRGHRGGHYRGNGKS
WHQRTESELRKEGVF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagagcgatgtccagtgtgagattgaggttctggagtccatctatctggat
gagttgacggtcacacggaacgatgatggaggatggagagtgagtgtgatcctccacccc
tccactggagaagactgtctggcgcagtttgtccggctcacgctcacgctggacctggat
tcagagtacccggcgtctcctccctgcatctccatccaccatcccagaggtctctcagac
gacaagctgctcagtttacagcgcagtctgcactcggaagctgaggagtgtgtggggaca
cccgtgctctatcagctcattgagaaagccaaagagatcctgaccgagagcaacattcct
cacggcagctgtgtgatctgtctgtacggctttaaggaggacgaggtgttcaccaagacg
agctgctatcattacttccactctcactgtctgggccgctacatcacacactcggaggag
gagctgaaggagcgagtgagggagctggaggaggacaagaccagagacggaggagaggac
gaggagctgtgtgtggtgtgtcccgtctgcagagagccgctgatgtacgacgtgaacgct
ctgctttcatctccggtacccaaattccctcagcaggaggatgaagcagtcactgcagag
tttaagagaaagtgggcggagctacagaagattctggaacgtcagagagaaaaaggggga
gtcatcgaccccgaggccgagtctaatcgcttcctcattcacattaaccataccctcacc
gactcctcagaccccgcctgtgtccatgctccagatactgactccacccaacagctgtct
cctcctcctcctccccctcctcctgaatgctctaatcagaaccctcaacctcttcgagcg
gagaacaggccgtgcccgtcccatcgccgagctcctcacgctcctcacggcaggagaaca
caggtggagtttagaggaggcaggagagaccgaggaaaaggaggaggtggacgaggagga
catgcggtttctccacctgtgctggagaacctggccaagctcagcatgtctgcagcagaa
agcagcaggaacagcggagcggcacaagacaccagcgaacacggagacggacttttagcc
gaagcgaaagagcagccgagacaggctttaggagacgagagcgttgcaatgagccgtgag
gagatgaatgagtcgaaacacgagcggcacgtcacgtcaggcggcgctcaaaccggagca
agggaacgaggaacgaggcaggatcgagaccggggaaggagacacggaccacgtgggcca
ccgtacagccactggcacgagagaaacgctcagtgggacaacggtgggaacgttcaccat
caccaccacagaggaacgagaggacaccgggggggtcactacagaggaaacgggaaaagc
tggcatcagagaaccgagagcgagctcaggaaggaaggagttttctga
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integrated database retrieval system
