Ictalurus punctatus (channel catfish): 108280417
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Entry
108280417 CDS
T04658
Name
(RefSeq) ATP-binding cassette sub-family D member 3 isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108280417
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108280417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108280417
Enzymes [BR:
ipu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
108280417
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
108280417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
BrxL_ATPase
SMC_N
AAA_23
AAA_21
AAA_29
Rad17
ATP-synt_VA_C
AAA_18
Motif
Other DBs
NCBI-GeneID:
108280417
NCBI-ProteinID:
XP_053529644
UniProt:
A0A9F7QT81
LinkDB
All DBs
Position
20:24788306..24806037
Genome browser
AA seq
660 aa
AA seq
DB search
MAAVSKYLTGRSCSITGALALISFCLLKHRRRASQFNNRSNRNSDSSQDGRKDKATVDQL
FVSRIYKILKVLIPQLFCKESGYLVLIAAMLLARTYCDVWMIHNGTMIESAIIGRSTKAF
RTYLFNFMAAMPLISLVNNFLKLGLNKLKLCFRVRLTDHLYTHYLRGFTYYKMGNVDNRI
MNPDQLLTQDVERFCNSVVDLYSNISKPLLDIVIYLLKLTTASGGEGPVALLSYLVFSGL
LLTWLRRPIGKMTATEQKHEGEFRYTNSRLITNSEEIAFYNGGQREKINIHQTFHKLVEH
LKRFIWFRFSVGVVDSIVAKYIAFMVGYLVVSRPFLDPTNTRHDHSTHAQRLEEYYQSGR
MLISMAQALGRIVLAGREMSRLSGFTLRISEIQDVLKDLNSGRYERSSVVSAGGKAPEEV
ENSALLPGTGDIIIADNIIRFEHVPLLTPTGDVLIRDLSFEVLSGANVLVCGPNGCGKSS
LFRVLGELWPLFGGRLTKPHRGKLFYIPQRPYMTLGTLRDQVIYPDTHKEQIRKGILDQV
LKDYLDKVQLSHILERERESGWESEQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTS
AVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEFYLHMDGRGGYEFKRITEDTVQFGS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgagtaagtacctgacaggcaggagctgctccatcacaggtgctttagcc
ttaatctctttctgtctgctcaaacacaggcgacgagcttcacagttcaataacaggtct
aacaggaattcagactcatctcaggatggcaggaaggacaaagccactgtggatcaactc
ttcgtctctcgcatctacaagatcctgaaggttttgattccgcagctgttctgtaaagag
tcggggtatctggtgctcatcgctgccatgcttctggctcgaacgtactgcgatgtctgg
atgatccacaacggcaccatgatcgagagtgcaatcattggacgatcaacaaaagcattc
agaacctatttatttaacttcatggctgctatgccacttatctcattagtgaataatttt
ctgaaactgggactgaacaagctgaagctgtgcttccgtgtcaggctcacagatcacctg
tacacacactacctcagaggcttcacctactacaaaatggggaatgtggataatcgcatc
atgaatccggaccagctgctgacacaggatgtggaacggttctgtaacagcgtggtggac
ctgtactccaacatcagcaagcctctacttgacatcgtcatttacctcctcaaactgacc
acagcatccggaggcgagggcccagttgctttgttgagttatctggtgttctctggtctg
ttgttgacgtggttgcggcggccgatcgggaaaatgactgcaactgaacagaaacatgaa
ggagaattcagatacacaaactcccggctaattactaacagtgaggaaatagccttctac
aatggtggccaaagagaaaagatcaacatccatcaaactttccacaaactggtggaacat
ctgaagcgttttatctggttccgcttctccgttggagttgtagacagcatcgtggctaag
tacatcgccttcatggtcggatacctggtggtcagtcggccatttttagacccgacaaac
acgcgccatgaccacagcacacacgcccagagactggaggagtattatcagagtggcagg
atgttaatcagtatggctcaggctttggggagaatcgttctggcggggagagagatgagc
cgactgtcaggcttcacattgaggatcagtgagattcaggacgtgttgaaggatttaaac
agtggcagatatgagcgcagctccgtcgtctcagcaggaggaaaagctccagaggaagtg
gagaactcggctctgctccccggcacgggagacattattatagctgataacatcatcagg
tttgaacacgtgcccctgttaacacctaccggagacgtcctgatccgggatttatccttc
gaggtgctgtcaggggcgaatgtgttggtgtgtggtccaaacggctgtgggaagagttca
ctgttcagagttctgggagagttgtggcctctgtttggagggcgtctcaccaaaccacac
agagggaaactcttctacatcccacagagaccgtacatgactctaggtacactcagggat
caggtgatttatcccgacacacacaaggagcaaatccggaaaggaatcttggatcaggtg
ttgaaggattacctggataaggtgcagctgtctcacatcctggagagagagagagagagt
gggtgggagagcgagcaggactggatggatgttctgagtggaggagagaaacagaggatg
gcgatggctcgtctgttctaccacaagcctcagttcgccattttagacgagtgtacgagc
gccgtgagtgtggacgtggaggattacatctacagccactgcaggaaggttggaatcaca
ctgttcactgtctcacacaggaagtcactgtggaaacaccacgagttttaccttcacatg
gatggtagaggaggttatgagttcaagcgcatcactgaggacacagtgcagttcggctcc
tga
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