Ictalurus punctatus (channel catfish): 108280439
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Entry
108280439 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31 isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108280439
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108280439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108280439
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108280439
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108280439
Multi subunit type E3
LUBAC complex
108280439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
IBR
PUB
Zn_ribbon_RanBP
UBA
UBA_7
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
108280439
NCBI-ProteinID:
XP_053529509
Ensembl:
ENSIPUG00000002244
UniProt:
A0A9F7QSZ2
LinkDB
All DBs
Position
20:1748216..1765536
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AA seq
1051 aa
AA seq
DB search
MLSDQLEEARSWAEAILSRPGSAQEIRNGVSAVANISLPPSAKYRHIAAETMLVENSVGS
NKKEAMASLQKLSTALNILEKYGSNLTSPSRPKYWRTVKHNNPVFRATVDAIHVSDTENY
GGRGVLCLYGYTNQQADGLSFPEDVTEPDVAKVAAVTLEVMSLRTELDMLIKDTHPHPEF
FERIIPSLAQTDDDNGLSSDALVISPSSEKPWERLLLPTLSPSQPSVSSITPAKPTAVCD
ENCGICGIFLVTSHCTTCSQRLCVECDRLYHSHPARAAHARVQVAISRTSKTLSGSLATW
HCSYCTTMNTLQQVLCNTCERPRLASTAPVVQEDPPQPSTITEWQCKSCTVVNSGSSILC
EVCERPRLATRPPVTPSRPTPCPTGLLDTGQWICQFCTYANQTPSPRCEMCDLARSDPAP
SPSKPLPPSPIKDVTPKSPPVEDPDLKRQRLMREEGLKLIKLIREAEGKGVSPEEVYTSL
RVSGGISGPPCDWVKTELPHRLDEICAMAASFQHKPKPLQTTAVHHNESQKTCVPLSRAE
AKQAWLTAGGDSEKAARQALRDRLARVKELASLGFTDSAACEEALRQSGGEVKGALVLLQ
RPLLEHFHKRMWSDEPEPIIDINHPDKQRVCRRLLAMYNLPSWGRCELALSLLRDPGAPY
TLEDVVQAVRESHDRDFIRRVLAKECPICLSLFPHSKMQSLTSCQCSVCCECFKQHFTIA
VRDKHIRDMVCPVCSEPDINDPEHLNSYFSTLDIQLRECLEPEVYELFHKKLTEQALIKD
PKFLWCSHCSYGFIYDGDQLKVTCLQCRNSFCAQCKKPWEAQHAGLSCEQFQLWKRENDP
EYQRQGLAGYLRDNGITCPNCRFQYALARGGCMHFSCSQCRYQFCSGCNNPFHTTCAVPQ
CSVTGLHAHHPRDCLFYLRDWEPTRLQALLQKCGVAFNTDVPPGTQTGVCGVIEQKDDGT
RQTDSACGAQTQPDQAGLCEKHYREYLVSLINGHSIDPAPLFEANELHLACRRYQVEIMQ
GEAEDDRTYYARLLKKLMDDVPLGDKVPRKK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagatcagttggaggaagcgaggagctgggccgaggcgattttatccagaccc
ggctctgctcaggaaatcaggaacggcgtgtcggccgtggccaacatctctctgcctccg
tcggctaaataccgtcacattgccgcagagaccatgctggtagaaaacagcgttgggagc
aacaagaaagaggcaatggcgtcactgcagaaactgtccacagcgctcaacatcctggag
aagtacggctccaacctgaccagccccagcagacccaagtactggcgtacggtgaaacac
aacaacccggtgttcagggccacggtggatgctattcacgtgagtgacactgaaaactac
ggtgggcggggcgtcctgtgcctttatggctacaccaatcagcaggcagacggcctgagc
tttcctgaagacgtcacagagccggacgtcgccaaagtggcggcggtgacgctggaggtc
atgagtctgcgcacagagctggacatgctcatcaaggacacccatcctcacccagagttc
tttgagagaatcatcccctctctcgctcagacggatgacgataacggattgagctcggac
gcgttagtgatatctccgtccagcgagaagccatgggagagactcttgctgcccacactg
tctccgtctcagccctctgtctcctccatcacacccgccaagccaacagctgtctgcgat
gagaactgcggcatatgtgggatcttcctcgtgacgtcccactgcactacgtgctcccag
cgtctgtgtgtagaatgcgaccgactctaccactcgcacccggctcgcgccgcacacgcc
agggtccaagtggcaatctccagaacctccaaaacactcagcgggtctctggccacgtgg
cattgttcgtactgcacgacgatgaacactctgcagcaggtgttgtgcaatacctgtgag
cgccctcgtctggcctccactgccccggttgtacaggaagatcctccacagccatctacc
attacagagtggcagtgtaagagctgtacggtggtgaactccggcagcagtattctgtgt
gaggtgtgtgagcgcccccgtctggccacacgccctcccgtgacgccttctcgacccacg
ccgtgtcctacaggactgttagacaccggtcagtggatctgtcagttctgtacttacgcc
aaccagacgccgtcaccccgttgcgaaatgtgcgacctggcgagatcagaccccgccccg
tcgccttctaaacccctcccaccctccccgattaaggacgtcacgccgaaaagtccgccg
gtggaggatccggatttgaagaggcagagattaatgcgggaggaggggcttaaactgatc
aagctgatccgagaggctgaagggaagggcgtgagccccgaagaggtgtacacgagtctg
cgtgtttcggggggcatcagcgggccgccgtgcgattgggtgaagacggagttgcctcac
aggctggacgagatctgtgccatggctgcgtcgttccagcacaagcccaaacctctccag
actacagccgtgcatcacaacgagtcccagaagacctgcgtgcctttatccagagccgaa
gccaagcaggcctggctcacagcagggggcgacagtgagaaagcggccaggcaggcgctc
agggaccgcctcgctagagtgaaggagctagcctctcttgggttcaccgactcggcggcc
tgcgaggaggctttgaggcagagcggcggtgaggtgaaaggagctctggtgctgctgcag
cgtcccctgctggagcatttccacaagcgcatgtggagcgacgaacccgaacccatcatc
gacatcaaccacccagacaagcagcgtgtgtgtcgcaggctcctcgccatgtacaatctg
cccagttgggggcgctgtgagttagccctgtctctgctgcgtgaccctggcgccccctac
acgctggaggacgtggtacaggccgtgcgcgagtcacatgaccgtgacttcatccgtcgt
gtgttggcgaaagagtgccctatttgtctgtccttgtttccccacagcaagatgcagtct
ctgacatcgtgccagtgctctgtttgctgcgagtgctttaagcagcacttcaccatcgcc
gtgagagacaaacacatccgggacatggtgtgtcccgtgtgctccgaacccgacatcaac
gaccctgaacacctcaacagctacttctccactctggacatccagctgagggagtgcctg
gagccggaggtctatgaacttttccataagaagctgactgaacaggctctcatcaaggac
ccaaagttcctgtggtgcagccattgctcgtacggtttcatctacgacggagatcagctc
aaggtcacttgtcttcagtgtcggaacagtttttgcgctcagtgcaagaaaccttgggag
gctcagcatgccggcctgtcgtgtgaacagttccagttgtggaagcgtgagaacgatcca
gagtaccagcgccagggtttggctggttacctgcgcgacaatgggatcacgtgtcctaac
tgcaggtttcagtacgctctggctcgtggaggctgtatgcacttcagctgctctcagtgt
cgctatcagttctgcagcggctgcaacaaccccttccacacgacgtgtgcggtgcctcag
tgcagtgtgaccggtcttcatgctcatcaccccagagattgtctgttttacctgcgtgac
tgggaaccgaccagactgcaggccttattgcagaaatgcggcgtggcctttaacaccgac
gttcctccaggaacacaaacaggtgtgtgtggtgtgatcgagcagaaggatgacggtact
cgtcagacggactcagcgtgcggggctcagacgcagcccgaccaggcgggactctgcgag
aaacactaccgcgagtaccttgtgagcctcatcaacggccactccatcgaccccgcccct
ctcttcgaagcgaacgagctgcacctggcctgcaggagataccaagtggagatcatgcag
ggggaggccgaggacgacaggacgtactacgctcgactactgaagaaactgatggacgac
gttcctctgggcgataaagtcccgcgcaagaagtga
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integrated database retrieval system
