Ictalurus punctatus (channel catfish): 108280460
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Entry
108280460 CDS
T04658
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108280460
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
108280460
NCBI-ProteinID:
XP_047018498
Ensembl:
ENSIPUG00000010134
UniProt:
A0A979FE21
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Position
20:complement(13749657..13765078)
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AA seq
650 aa
AA seq
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MTEMPSRCHQRKAPKRRRTPHDEATFKKMFKAMDEPVCLISSDSEGRLCVVKEAKEILDG
ITQPVIVVSVVGLYRTGKSYLMNRLAGKQTGFALGSTIESKTKGIWMWCVPHPIKSGHTL
VLLDTEGLGDVDKGDEKHDTWIFCLAVLLSSTLVYNSLGVIDNNALEKLHYVTELTENIR
VKAQRGAGDDDSAEFMRVFPSFIWSVRDFTLKLEKEGRAITADEYLERALELKAGSSSSL
EKFNLPRRCLRHFFAERRCFVFPRPAEDDDLARMEELSETDLRPRFLQRAEEFCNYVFSS
AKPKTLTGGQMLTGSALCILAELYVEAIRSGRIPCLENAVVSLAQIQNERAVKQGLQVYQ
SQVELDCLPLDPSELSDIHRKAETAAIDAFISISFNDTEQKAQLKLMEEIQTVYQELCGQ
NREECSNVCKLELTQVFTPLEEAMNDGSFMHPGGYTEYRDKLQSCTNEYRARTHKQMMSE
EVLSEYLKEKDQFGKNILLADKHLTKTEQKKEVERLRKDALKLENESLMRKKKLQEQAFQ
DQQRTYEQNINQLLERMEKERKTAREDNERVLTAKLREQSALLEKGFKEKADMMNQQILR
LRGEMNNEDQSKRSVLSKVVSSVGTAASLFLPGIIPKAAGLVTSFFSRFL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatgccatcaagatgccatcagaggaaagctccaaagcggagaagaacgccc
catgatgaagccacctttaaaaagatgttcaaagccatggatgagccagtatgtctgatc
agcagcgattctgaaggacggctatgtgtcgtgaaggaagctaaagagattctggatggg
atcactcagccagttattgtagtgtctgtggtagggctttaccgcacggggaagtcttac
ctcatgaaccgcctagcaggaaaacaaacaggctttgcactaggcagcaccatagagtca
aaaactaaaggcatctggatgtggtgtgttccacaccccattaaatcaggacacactctg
gtgctgctggacactgagggactcggtgatgtggacaagggtgatgaaaagcatgacaca
tggatcttctgcctggctgtcctgctcagtagcactctggtctacaacagccttggggtc
atagacaacaatgcactcgagaagctacactatgtgacagaactgactgagaacatccga
gtgaaagcacagagaggtgctggcgatgatgactcagcagagttcatgcgagtcttcccc
tccttcatctggtccgtgcgagacttcacgctgaagttggagaaggaaggcagggctatc
acagctgatgaatatctggaacgtgctttggagcttaaagctggttcttcctctagtctt
gagaagttcaacctgcccaggcgctgtttgcgtcactttttcgcagaacgtcggtgtttt
gtattcccacggccagccgaagatgatgacctggcaagaatggaggagctgtctgagacg
gatctcaggccacgatttctgcagcgtgctgaggagttctgcaactatgtgtttagcagt
gccaagccaaaaaccttaacaggggggcagatgctcacaggcagtgctctgtgcattctg
gcagagttgtatgtggaggcaattcgtagtggccggattccttgtctggagaatgcagtg
gtgtctttggctcagatccagaatgagcgggcagtgaaacagggcctgcaggtctaccag
agtcaggttgagttagattgccttccacttgacccatctgagctttcagatatccacaga
aaagcagagactgcagctatcgatgccttcatcagcatttccttcaatgatactgagcaa
aaagcacagctgaagctcatggaagagatccagactgtgtatcaggagctgtgtggtcaa
aatcgagaagaatgttcgaatgtgtgtaagctggagctgacacaggtgtttactcctctg
gaggaggctatgaatgatggttcatttatgcaccctggaggatacacagagtaccgtgat
aaactccagagctgcacaaatgaatacagagcacgcacacacaaacagatgatgagtgag
gaagtgttgagtgagtatctaaaggagaaggatcagtttgggaagaacattcttttagct
gataagcacctcactaaaacagaacagaaaaaagaagtggagcgtttgcgaaaagatgct
ctaaaactggagaacgaatctttaatgaggaagaagaagcttcaggagcaggcattccag
gaccagcagaggacctatgagcaaaacataaaccagctgctggaacgcatggagaaagaa
aggaagacagcaagggaagataacgaacgagtgctgacggctaaacttagggaacagagc
gctctgctggaaaaaggatttaaggaaaaagctgatatgatgaatcaacagattttaaga
ctgagaggagagatgaacaatgaggaccagtcaaagcggtctgtactcagtaaggtagtg
agcagtgtgggcactgcagctagtctgttcctgccgggcatcatccctaaagctgccggt
ttggtcacatcattcttctcacggtttctttga
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