Ictalurus punctatus (channel catfish): 108280462
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Entry
108280462 CDS
T04658
Name
(RefSeq) guanylate-binding protein 1 isoform X3
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108280462
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GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
108280462
NCBI-ProteinID:
XP_017350936
Ensembl:
ENSIPUG00000010067
UniProt:
A0A2D0T7V9
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Position
20:complement(13690854..13712326)
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AA seq
627 aa
AA seq
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MFKTMDEPVCLISSDSEGRLCVMKKAKEILDGITQPVIVVSVVGLYRTGKSYLMNRLAGK
QTGFALGSTIESKTKGIWMWCVPHPIKTGHTLVLLDTEGLGDVHKGDEKHDTWIFCLAVL
LSSTLVYNSLGVIDNNALEKLHFVTELTENIQVKAQRGADDDDSAEFMRVFPSFIWSVRD
FTLKLEKEGKAITADEYLESALALKAGSSSSIEKFNLPRRCLRHFFAERRCFVFPRPAGD
DDLARMEELSETDLRPQFLQRAQEFCSYVFSSAKPKTLTGGRMLIGSALCSLAEVYVEAI
RSGRIPCLENAVVSLAQIQNERAVEQGLQVYQSQVFESVCFPLDPSVLSDIHRKAETAAI
DAFISISFNDTEQKAQLKLMEEIQTVYQELCGQNREECSNVCKLELTQVFTPLEEAVNDG
SFMHPGGYTEYRDKLQSCTNEYRARTHKQMMSEEVLHEYLREKDQFVNNILLADQRLTEA
EQYKEVERLKKEVLEQKNKSLEEMKQFQEQTLQDQKRTYEQHVTQLLERMEKESARAKED
NERVLDAKLREQRILMEEGFKERAAQMNVEIESLKGEMKNDDESKRSTLGMVVDGVGIAA
SLFLPGIIPKAAGIAVSYLSRFLDRKK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaccatggatgagccagtatgtctgattagcagcgattctgaaggacggcta
tgtgtcatgaagaaagctaaagagattctggatgggatcactcagccagttattgtagtg
tctgtggtagggctttaccgcacggggaagtcttacctcatgaaccgcttagcaggaaaa
caaacaggctttgcactaggcagcaccatagagtcaaaaactaaaggcatctggatgtgg
tgcgttccacaccccattaaaacaggacacactctggtgctgctggacactgagggactc
ggggatgtgcacaagggtgatgaaaagcatgacacatggatcttctgcctggctgtcctg
ctcagtagcactctggtctacaacagccttggggtcatagacaacaatgcacttgagaag
ctacactttgtgacagaactgactgagaacatccaagtgaaagcacagagaggtgctgac
gatgatgactcagcagagttcatgcgagtcttcccctccttcatctggtctgtgcgagac
ttcacgctgaagttggagaaggaaggcaaggctatcacagctgatgaatatctggaaagt
gctttggcgcttaaagctggttcttcctctagtattgagaagttcaacctgcccagacgc
tgtttgcgtcactttttcgcagaacgccggtgttttgtattcccacggccagccggagat
gatgacctggcaaggatggaggagctgtctgagacggatctcaggccacaatttctgcag
cgtgctcaggagttctgcagctatgtgtttagcagtgccaagccaaaaaccttaacaggg
gggcggatgctcatcggcagtgctctgtgcagtctagcggaggtgtatgtggaggcaatt
cgtagtggccggattccttgtctggagaatgcagtggtgtctttggctcagatccagaat
gagcgagcagtggaacagggcctgcaggtctaccagagtcaggtttttgagtcagtgtgc
tttccacttgacccatctgtactatcagacatccacagaaaagcagagactgcagctatc
gatgccttcatcagcatttccttcaatgatactgagcaaaaagcacagctgaagctcatg
gaagagatccagactgtgtatcaggagctgtgtggtcagaatcgtgaggaatgttcaaat
gtgtgtaagctggagctgacacaggtgtttactcctctggaggaggctgtaaatgatggt
tcatttatgcaccctggaggatacacagagtaccgtgataaactccagagctgcacaaat
gaatacagagcacgcacacacaaacagatgatgagtgaggaagtgttgcatgagtatctg
agggagaaggatcagtttgtgaataatattcttttagctgatcagcgcctgactgaagca
gagcaatacaaggaagtggagcgtttgaaaaaggaggttcttgagcagaagaacaaatct
ttagaggagatgaagcagtttcaagaacagacattacaggaccagaagaggacctatgag
caacacgtaacccagctgctggaacgcatggagaaagagagtgcgagagcaaaggaggat
aacgaacgagtgctggatgctaaacttagagaacagaggattctgatggaagaagggttt
aaggaaagagcggctcagatgaatgtagagattgaaagtctgaaaggagagatgaagaat
gacgacgagtcaaagcgatctacactcggtatggtagtggacggagtgggcattgcagca
agtctgttcctgcctggcatcatccctaaagctgctggtattgccgtatcatacttatca
cgatttttggatcgcaagaagtag
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