Ictalurus punctatus (channel catfish): 108280481
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Entry
108280481 CDS
T04658
Symbol
scinlb
Name
(RefSeq) scinderin like b
KO
K05768
gelsolin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108280481 (scinlb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108280481 (scinlb)
04147 Exosome [BR:
ipu04147
]
108280481 (scinlb)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
108280481 (scinlb)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108280481 (scinlb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gelsolin
DUF7505
Motif
Other DBs
NCBI-GeneID:
108280481
NCBI-ProteinID:
XP_053529670
Ensembl:
ENSIPUG00000013768
UniProt:
W5UTS7
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All DBs
Position
20:23247286..23263651
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AA seq
720 aa
AA seq
DB search
MVSHKEFDTAGKAPGLQIWRIENMDLKPVPKNFYGSFYTGDAYLLLYTTTAPSYYIHMWL
GDECSQDESGAAAIFATQLDDHLGGGPVQFREVQNNESRTFLGYFKSGIKYQKGGVASGF
NHVVTNEANVKRLLHVKGRRVIRATEVNFSWASFNKGDCFIVDLGKNIYQWMGCDCNRFE
KVKASQVAIDIRDNERNGRAKLCMVEEGSEPQEIIEVLGPKPSIAPATPDDENVELFNKK
KGALYLISDATGSMKTSSVAPSSPFKQEMLSLDDCYILDNGVDGNVFVWKGSNANTQERK
VAMKVAQDFIKEKNYSSKTQIQVLPAGGETTLFKQFFSNWKDKDQTTGPSKAYTIGQIAQ
VKQVPFDASTLHTNQAMAAQHNMVDDGSGKVQIWRVEGGARVPVDPAAYGQFFGGDCYII
LYSYKQGSREQHIIYTWQGLKSTQDELAASAFLTVQLDDSMGGAPVQVRVTQGQEPPHLM
SLFKGKPMIIHSGGTSRKGGQTQAGTTRLFHVRTSTAKATRAVEVKPCASNLNSNDVFVL
KSPDSLFVWRGVGASEEEVKGAKFVVSFLGGKPTDVTEGKEPAGFWTALGGKKEYQTSVT
LKNTVKPPRLFGCSNKSGRLTVEEVPGDFGQADLATDDVMLLDTWDQLFLWVGNEANEVE
KTGAPKIAKEYLDTDPSGRRGIPITTIKQGTEPPTFTGWFQGWDAKMWDTDPLDRIRARF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccacaaggagttcgatacagccgggaaggcgcctggtctgcagatctggcgt
attgagaacatggacctcaagcctgttcccaagaacttctatggaagcttctacaccgga
gacgcctacctcctgctgtacaccacaactgcaccatcctactacatccacatgtggctg
ggagacgagtgctcgcaggacgagagcggcgcggcggccatctttgccacgcagctggac
gaccatctcggcgggggcccggtgcagttccgcgaggtccagaataacgaatctcggacc
ttcctgggatacttcaagtctggcattaagtatcagaaaggtggtgttgcgtctggtttc
aatcacgtggtgactaacgaagcgaacgtgaagcgtttgctgcacgtgaagggccggaga
gtgatcagagccaccgaggtgaacttttcctgggccagctttaataagggcgactgcttt
atcgtggacctgggaaagaacatctaccagtggatgggctgtgattgtaaccgctttgag
aaggtgaaggcgtctcaggtggccatcgacatccgcgataacgagcgcaacggcagagcc
aaactgtgcatggtggaggaaggatctgaacctcaggagattattgaggttctcggaccc
aaaccgagcatcgctcctgctacccctgatgacgagaatgtcgagctgttcaacaagaaa
aagggagcgttgtacctgatctccgacgccaccggctccatgaagacgtccagcgtggct
ccgtccagtccgttcaaacaggaaatgctgtcactcgatgactgctacatcctggacaac
ggcgtggatggcaacgtgttcgtatggaaaggttcgaacgctaacacgcaggagcgcaag
gtggccatgaaggtggctcaggactttattaaagagaagaactactccagtaaaacacag
atccaggtgctgcctgcagggggcgagaccactctcttcaagcagttcttctcgaactgg
aaggataaggaccagaccacgggcccgagcaaagcgtacaccatcgggcagatcgcacag
gtgaagcaggtccccttcgacgcctccaccctgcacaccaaccaggccatggcggcgcag
cacaacatggtggacgacgggtccggaaaggttcagatctggcgtgtggagggcggagct
cgcgtccccgtggaccctgcggcatacggtcagttcttcggaggcgactgttacatcatc
ctgtacagctacaaacagggcagccgagagcagcacatcatctacacctggcaaggatta
aagagcactcaggacgagctggccgcctccgccttcctcaccgtgcagctggacgactcc
atgggcggagctcccgtccaggtgcgtgtaactcagggtcaggagccgcctcacctgatg
agcttgtttaaaggaaagcccatgatcatccacagtggaggaacgtcacgtaaaggaggg
cagacgcaggcgggaaccacgcgtctcttccacgtccgtaccagcaccgccaaagccact
cgcgccgtggaggtgaagccttgtgcatccaacctcaactccaacgatgtgttcgtgctg
aagtctcccgattcgctcttcgtgtggaggggcgtcggtgccagcgaggaggaagttaaa
ggtgccaaattcgtcgtcagcttcctgggagggaaacccaccgacgtcaccgagggcaaa
gagccagccggattctggaccgctctgggagggaagaaggaatatcagacttccgtgact
ctgaaaaataccgtcaaaccccctcgtctgttcggctgctccaacaagtctggccggctc
acggttgaggaggtacccggtgacttcggccaggcggatttggccaccgacgacgtcatg
ttgctggacacttgggatcagctcttcctgtgggtgggcaacgaagctaacgaagtggag
aagaccggcgctccaaaaatcgctaaagagtacctggacacagacccgtccggccggcgt
ggtatccccatcaccaccattaaacaaggcaccgagcctccgaccttcacaggctggttc
cagggctgggacgccaaaatgtgggacaccgaccccctggatagaatccgcgctcgcttt
taa
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