Ictalurus punctatus (channel catfish): 108280518
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Entry
108280518 CDS
T04658
Symbol
htr5aa
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate a
KO
K04161
5-hydroxytryptamine receptor 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108280518 (htr5aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108280518 (htr5aa)
04082 Neuroactive ligand signaling
108280518 (htr5aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108280518 (htr5aa)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Biogenic amine
Serotonin
108280518 (htr5aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
DUF5337
DUF2208
Motif
Other DBs
NCBI-GeneID:
108280518
NCBI-ProteinID:
XP_017351046
Ensembl:
ENSIPUG00000001879
UniProt:
A0A2D0T863
LinkDB
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Position
20:complement(906025..909659)
Genome browser
AA seq
344 aa
AA seq
DB search
MSNYSFSTLSNHSSLHGNLHRPMTVFSVLTFTLLAMLVLATFVWNMLVLVTILRVRTFHR
VPHNLVASMAISDVMVAGLVMPLSLVRELYERRWILGRALCQMWISFDVLCCTASIWNVT
AIALDRYWSITRHLEYTLKRRKRISNVMIGLTWMLSSIISFSPQFGWGETYSEETMECQV
SQEPSYTVFSTFGAFYLPLCVVLFVYWKIYKAAKFRIGSKKNNIVTPAPEAVEAKEATRQ
RPQTTFTVRHATVTFQTDGETWREQKERRAALMVGILIGVFVLCWIPFFLTELITPLFSW
HVPPTWKSIFLWLGYSNSFFNPLIYTAFNKNYNSAFRNLFNKQR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactacagcttctccacactgtccaatcacagctcgcttcatggaaacctgcac
agacccatgacagtgttcagtgtcctgaccttcaccttgttggccatgctggttttggcc
acattcgtgtggaacatgctggtcctcgtgaccatcctaagggttcgcactttccatcgt
gttcctcacaacctggtggcctccatggccatctcggacgtcatggtggctggactggtg
atgcccctgagcctcgtccgggagctgtacgaacgccggtggatcctcgggcgagctctc
tgtcaaatgtggatctccttcgacgtgctctgctgcacggccagcatctggaacgttacc
gccatcgcgctcgatcgctactggtccatcacacggcacctcgagtacaccctgaagcga
cgcaagaggatctccaacgtgatgatcggacttacatggatgctctcctcgatcatctcc
ttctcgccgcagttcggatggggagagacatactcggaggaaacgatggagtgccaggtg
agccaggaaccatcctacaccgtcttctccacctttggtgctttttatttgccgctctgt
gtcgtactgttcgtctactggaagatctacaaagcagccaaatttcgcatcggatccaag
aagaacaacattgttactccagctccggaggctgtcgaggcgaaagaagcgactcggcag
cgtcctcagacaacgtttacggtccgtcacgccaccgtaacgttccagacagacggagag
acatggcgggagcagaaggagcgtcgtgctgcactgatggtcggaatcctgatcggcgtt
ttcgtcctctgctggatccccttcttcctgaccgagctgatcacaccgctcttctcgtgg
cacgtaccacccacctggaagagcatcttcctctggctcggctactccaactcgttcttt
aacccgctcatctacacggcctttaacaagaactacaacagcgccttcaggaacctcttc
aacaagcagcgctga
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