Ictalurus punctatus (channel catfish): 108280532
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Entry
108280532 CDS
T04658
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108280532
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
108280532
Condensin II
108280532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
Sec2p
AAA_29
CCDC39
DUF6361
THOC7
Laminin_II
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
108280532
NCBI-ProteinID:
XP_017351098
Ensembl:
ENSIPUG00000005409
UniProt:
W5UBD5
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All DBs
Position
20:complement(4897547..4923384)
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AA seq
1288 aa
AA seq
DB search
MPSKTSKSCSVAKPRGKGSQDDSEIKPHAEVHADEQDAPQTNDAAGEAVDNRSLEEILGS
IPPPPPPAMTNEPGAPRLMITHIVNRNFKSYCGEQILGPFHKRFSCIIGPNGSGKSNVID
SMLFVFGYRAQKIRSKKLSVLIHSSDEHKDIQSCTVEVHFQKIVDKEGDDYDVIPDSKFY
VSRTAGKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQT
EHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEQRGEKLNRVKLVEKEKNALEGEKNK
AVEFLTLENDMFKKRSQLCQFYVHDLQQRVAEKEADKQEIQEDTKGLTEKSNQLAEEMKG
KNEALKDVEKKMGKLTKFIESQKEKFTQLDLQDVEVREKLKHTKNKTKKLHKQLQKDKEK
LEEVKNVPASSEKIITEASAQKEVLEKDKVKVEAALVQVMEHLKEETSGLQQEKEQKEKE
LLELSKAVNETRSHMDVAQSELDIYLSQHNTAVSQLNQAKEALQGTADTLRDRRAAIKEL
KVKVPKCEQEVKKDEGELKQISEQDGQAQAAVRDMRQKVEEAKSSLSSTRSRGKVLDALM
QQKRSGKISGILGRLGDLGAIDEKYDIAISSSCGALDNIVVDTIDTAQKCVTFLKAQNVG
VATFIGLDKMKVWERNMGAISTPENIPRLFDMVQVKDDSIRPAFYFALRDTLVAKNLDQA
TRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMRGRMGSSIGTEVTQEQLDKMESALK
EKVAQLQGWQQRKQQLEESVHKQRQELRDMKNTLEKYTASIQSLEEQEIHLKSQIKELEA
NVVAAAPDKAKQKQMEKNLEAFKKNYDAASSKAGKVEAEVKRLHNLIVDINSHKLKAQQD
KLDKINKELDECSSAITKAQVAIKTAGRNLKKAEETVSRLEIEIAENEKLMEELTEQLKK
LEDQAGEIMKSCQEAEEALPEVQELHRGVLQEIKGLQEQEHALQKESLNVRLKVEQIDTA
IAECQNKIKHWEKESTKLALHSIDDKSAEELPKLTTEQLVAIKSPDVIKNEIALLEDRCA
QMKPNLGAIAEFKKKEELYLQRVAELDEITTQRDNFKRSCEDLRKQRLNEFMAGFNIITN
KLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSSLALV
FALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADRLIG
IYKTHNTTKNVGINPKTIVLKDVEVASG
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaaacgagtaaaagctgttcggttgcgaagccccgggggaaagggtcgcag
gatgactcggaaataaagcctcatgcagaagtgcacgcggatgaacaggacgcgccgcag
actaatgatgccgctggtgaggcggtggataaccggagcctggaggagattctcggtagc
atccctccacctccaccccccgcgatgaccaacgaaccgggtgctcctcgcctcatgatc
acgcacatcgtcaatcggaacttcaaatcgtactgtggggagcagatcctggggcctttc
cataagcgcttttcctgcattatcggtccaaacgggagcgggaaatccaacgtgatcgac
tcgatgctctttgtatttggatacagggcgcaaaaaatcaggtccaaaaagctgtctgtt
cttattcacagctctgacgagcacaaggacatccagagctgcactgtagaggtgcacttt
cagaaaattgtcgacaaggaaggagatgactacgatgtcatccccgacagcaagttttac
gtttcaagaaccgccggtaaagataattcctcctcctaccacatcaatggcaaaaaggcg
actttcaaagacgttggaactttgctccgtagccatggcattgaccttgaccacaaccga
tttctcattctccagggagaagtggagcagattgcgatgatgaagcccaaaggccagacg
gagcatgacgaaggcatgctggaatacctggaggacatcattggctcctgccgactcaaa
gagcccatcaacacgctctgcagacgagtggagctactgaatgagcagaggggggaaaag
ttgaatcgtgtgaagttggtagagaaggagaagaacgccctggagggtgaaaagaataaa
gcggtggaatttctcaccctggaaaacgacatgtttaagaagagaagccaactctgccag
ttctatgtacatgatttgcagcagcgtgttgccgaaaaggaagcagacaagcaagagatc
caggaggacaccaagggactgactgaaaaaagcaaccagcttgcagaggaaatgaagggg
aagaatgaagccctgaaggatgtcgagaagaaaatgggcaagctgaccaagttcattgag
agccagaaggagaagttcacccagttggaccttcaggacgtggaggtgcgtgagaagctc
aaacacaccaagaacaagaccaagaaactccacaaacagctgcaaaaggacaaggaaaag
ctggaggaagtgaaaaatgttcctgccagcagtgaaaaaatcatcacagaggcttctgcc
cagaaagaagtgctggagaaagataaggttaaggtggaagcagctctagtccaggtgatg
gagcacctgaaggaggagaccagtggcctgcaacaggaaaaggagcaaaaagagaaggag
cttctggagctaagtaaagctgtgaatgagacccgctcgcatatggacgtagctcagtca
gagctggacatctatctgagtcagcacaacacagccgtttcacagctcaaccaggctaaa
gaggccctacagggaactgctgacacactccgagaccgaagagctgccatcaaagagctg
aaggtcaaagtgcccaagtgtgagcaggaggttaaaaaggatgagggggagctgaagcag
atttctgagcaggatggacaggcccaggctgcggtcagggacatgaggcagaaggtcgaa
gaagccaagtcttctctgtcctccacccggagccgaggcaaagtgctcgacgcgctcatg
cagcagaaacgcagcggaaagatctccggcatcctgggacgtctgggtgatctgggagcc
attgatgagaagtacgacatcgccatctcatcaagctgtggcgcactcgacaacattgtg
gtggacaccatcgacacagctcaaaaatgcgtcacctttcttaaggcccagaatgttgga
gtggcaaccttcatcggtctagacaagatgaaggtctgggagagaaacatgggtgccatc
tccacaccagagaacattccccgtttgtttgatatggtccaagtaaaggacgattccatc
cgtcccgccttctacttcgccctgagagacacgctggtggctaaaaacctggatcaggcg
actcgagtggccttccagaaagataaacgctggagagtggtcactctgcagggacagatc
atcgagcaggctggtactatgacgggaggaggaggacgtgtaatgaggggcagaatgggc
tcctctattggcactgaagtcacacaggaacagctggacaaaatggagagtgcattaaag
gagaaggtggcgcagctgcagggctggcagcaaaggaaacagcagcttgaggagagcgtg
cacaaacagagacaggagctccgagacatgaagaacactttggagaaatacacagctagc
attcagagtcttgaggaacaagagattcacctgaagtctcagataaaagagctggaagca
aatgttgttgctgctgccccagacaaagccaagcaaaaacagatggagaaaaacctggaa
gccttcaagaaaaattatgatgctgcatccagcaaagcaggaaaggtcgaagctgaggtg
aaacgactccacaatctaatcgtggacatcaacagccacaagttgaaggcccaacaggac
aaactggataagatcaacaaagagctagatgagtgttcatcagcaatcaccaaagctcaa
gtggctatcaagacagcaggacgtaatctgaaaaaggcagaggagacagtttcacgactg
gaaattgagattgctgagaatgagaaattaatggaggagctcacagagcaactgaagaaa
ctggaggatcaagcaggagagatcatgaagtcctgccaggaggccgaggaggctctgcct
gaggtgcaggaactgcatcggggggtcttgcaggagatcaagggccttcaggaacaagag
catgctttgcagaaagagtctctgaatgttcggctgaaagtggagcaaatcgacacggcc
atcgccgagtgtcagaataagatcaaacactgggaaaaagagtccacaaagcttgctttg
cactcgattgatgataaatcagcagaggaactgccaaagctgaccacagagcagttggtg
gccattaaaagcccagatgtcatcaaaaatgagattgctcttttggaggatcgctgtgct
cagatgaagcccaacctgggtgctatagcagagtttaagaaaaaggaggagctttatttg
cagagagtagctgagctggatgagattaccacccagagagacaacttcaagaggagctgc
gaggacctgcggaaacagagactgaacgagttcatggctggctttaacatcattaccaac
aagctgaaggagaactaccagatgctgacactggggggtgatgctgagctggagcttgtg
gacagcctggaccctttctctgagggcatcatgtttagtgtgcgtcctccaaagaagagc
tggaagaaaatctataacttgtctggaggagagaagactctgagctctttggcgttggtc
tttgctctgcaccactttaagcccacgcctctatacttcatggacgagatagacgctgct
ttggatttcaagaacgtgtccattgtggcctgctacatatatgaacaaaccaagaatgct
cagttcatcatcatctctctgaggaacaacatgtttgagatggctgaccgcctgattggc
atctacaaaacacacaacaccactaaaaacgtgggaatcaaccccaaaaccatcgtcctc
aaagatgttgaagttgcatcaggataa
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