Ictalurus punctatus (channel catfish): 108280536
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Entry
108280536 CDS
T04658
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108280536 (sbno2a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108280536 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108280536
NCBI-ProteinID:
XP_017351112
Ensembl:
ENSIPUG00000019672
UniProt:
A0A2D0T8A1
LinkDB
All DBs
Position
20:19939354..19969903
Genome browser
AA seq
1607 aa
AA seq
DB search
MPVLPTSVAMDTEDFLHPEGPQLESPKYSAPGPPLPNAIESQLFSSNPWPFPQQTQYNQY
SYPMQQSGRQFQVNPSSLDEFSSFPDVDFSVLTSGRNGDFAPDLSCMDDLSNPSLFSSTP
DSLSEYADPAGFGIDSLSHIASEGSAVTPMWDTPGHSQGQLTRFQDLHNQDEINALLSNQ
PLTPYKLSEIGQTPPEEEEEADEEETEELGHVDTYAEYKPSKSTIGISHPDIVVETSTLS
SVPPPDITYTLSIPDNTIRTGMLSALQLEAIIYACQQHEVILQNDQRAGFLIGDGAGVGK
GRTIAGIILENYLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVLALNKIKYGDTATS
EGVLFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAV
LDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAME
IVAMDMKVSGMYIARQLSFSGVSFRIEEIALDEEFKVVYNKAARLWAEALEVFTRAADML
GLVSRKSLWGQFWSSHQRFFKYLCIAAKVRRLVELAKAEMNQGKCIVIGLQSTGEARTRE
VLDENDGHLDRFVSAAEGVFQSLVQKHFPLEKPKREKTAGNKRKRKPRGRPPKFPKHCVE
VGGVIKISDGSDSDSEDMDSDSNSSPDSLQDNDDVIFVNHINGPTAKLEELKQKLLAKIA
ELGKELPLNTLDELIDQFGGPEKVSEMTGRKGRVVRRPDGRVQYESRAEQGFTIDHVNIK
EKERFMDGEKLVAIISEAASSGISLQADKRVQNKRRRVHMTLELPWSADRAIQQFGRTHR
SNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNVENKYGT
KALDKITKAILGYIENKVPPPKGYPGGESRFFADMKKGMIDVGIFCKEPRFGLNTEKDCT
ITKFLNRILGLEVHQQNFLFQYFTNNFEYLIDKDKKEGKYDMGILDLAPGNDEIHEEKQE
VFLTPGNPQEGQVILYKISVDRGMPWVEACSKADKLTGENEGFYLSHKLRGSQPCVLLAE
QGRGRNLIVYKPNIGRQAHPENLENLQQRYRKVTPEEAKDCWENQFVFSFKKCSHANWKG
KCKQLEQGQECWLGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQ
VGIKIPENCVERVRSELSQMDSEVKRARQQKEQRAQEQRAQEQRAQEQRILQERLRLEQQ
KFLYSRKPFSRPAMHPPNPPPYPSPQPGWAALPPKSQAVDEVLDLTLSPCPSPEPKPTRA
NGVAARLKFPETFHLEELISQEQQRARRPPLHPNSLDTLQTIHTRKQQQHTVLSVLQQNR
ANPGHLLTPQQNSGQFNTQLLRHNGSKPDINTLTNHGIRMQQFQQHVNSVSRPPQLLQPS
PIQQDAHQHSLMHVHTHSLHTHVRENQMPVSEPAPLSLKLVQQGSLSSQSVTESSATPQD
NFSFDLELLGHPAYSLTSKGPPSPSFSCPSPGTSSLFSSDPQSSSLSDSISPSSLFAPSS
DRPHLPLPNGHCSSDAQDVHKALMARGSPVDRRHSVIQFNPLDWDAT
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttctccccacatctgtcgccatggacaccgaggacttcctgcacccggagggc
cctcagctggagagccctaaatacagtgcgcccggtcctccactccccaatgccatcgag
agtcagctgttttcctctaacccgtggccatttccccagcagactcagtacaaccagtac
agctatcctatgcaacaatctgggaggcagttccaggtcaacccctcatctttggacgag
ttcagctcgttccccgacgtggatttctccgtcctcacatcaggaaggaatggagacttt
gcaccagatctgtcatgtatggatgacctgtccaatccgtctctgttctcctctacccct
gactctctgtctgaatatgctgaccctgctggctttggcatcgatagcctatcccacata
gccagcgagggctctgccgtgacaccaatgtgggacacacctggacacagccagggacag
ttgaccaggtttcaagatttacataatcaggacgaaatcaatgccctcttgagcaaccaa
ccattaacaccatataagctctctgaaatcggtcagactccaccagaggaggaagaggag
gcagatgaggaagagacggaagaactcggacacgtagacacctacgccgaatacaagcca
tccaaatctactataggaatttctcatccagacattgtggtagagaccagcactctctcc
agtgtccctcccccagacatcacctacacactctccatcccagacaacactatccggacc
ggcatgctctctgccctgcagctcgaagccatcatctatgcctgccagcaacacgaggtc
atcctgcagaacgaccagagggcaggttttctgattggggacggagccggcgtggggaag
ggtcgcaccatagctggcatcatactggagaactacttaaaaggaaggaagcgagccctg
tggttcagtgtttctaacgatctgaagtatgacgcagaacgagacctcaaggacatcgac
gccccgaatattcctgtgctcgctttaaacaagattaagtatggagacacagctacctca
gagggcgtcctgtttgccacgtactcagcgctgatcggggagagtcaggcaggaggacag
caccgcacacgactcaaacagatattggactggtgtaaacctggctttgacggagtcatt
gtgtttgacgaatgccataaagccaaaaatgcgacgtccacgaagatgggcaaagctgtc
ctggacctacagaacaagctgccccgggccagggtggtgtatgctagtgccacaggtgcc
tctgagccaaagaacatgatctatatgagccgtttggggatttggggagagggaacaccc
ttcaggacatttgaggacttcctacatgccattgagaaaaggggtgtcggcgccatggag
atagttgccatggatatgaaagtcagcggcatgtacatagcccggcagctcagcttttcc
ggcgtgtcatttcggatcgaggaaatcgcactggacgaagagttcaaggtggtctacaac
aaggcagctcgactgtgggctgaagcgctggaagtgttcaccagggcagcggatatgctg
ggactggtctctcgtaagtccctctggggccagttttggtcctcccaccagcgcttcttt
aaatacctctgcatcgccgccaaagtgcgccgcctggtggagctcgctaaggctgagatg
aatcagggaaagtgcattgtgatcgggcttcagtcaaccggcgaggcccgcactcgtgag
gttctggatgagaatgatggacatctagaccgattcgtctctgcagctgagggtgtgttc
cagtctctggttcagaagcactttccattagagaaaccgaagagagaaaagactgctgga
aataaacgaaaacgaaaaccgagaggtcggccacccaaatttccaaaacactgtgtagag
gtaggcggagttattaagatcagcgacggctcggattcagactctgaggacatggacagt
gactcaaactcgtcccctgactcactgcaagacaacgatgacgtcatctttgttaaccac
atcaatggacctactgcaaaactggaggaattgaagcagaagctgctggctaagatagca
gagctgggaaaggagcttcctcttaacacactggacgagctgatcgatcaattcggaggc
ccagagaaagtgtccgagatgacgggtcgtaagggccgagtggtgcggaggcccgacggc
agggtgcagtatgaatcacgcgctgaacaaggattcaccatcgaccacgtgaacatcaaa
gagaaagaacgctttatggacggtgaaaagctggtggcgatcatctccgaggctgcaagt
tcagggatttctctacaggcagataaacgtgtgcagaataaaaggagaagggtgcacatg
actctggagctgccatggagtgctgaccgcgccatacaacaattcggccgcactcatcgc
tctaaccaggtaacggctccagagtacatcttcctgatctccgagttagcgggagagaga
cgctttgcttccatcgtggccaagcgcctggagagtttgggggcgctgacacacggcgat
agacgagccaccgagtccagagatctgagcaaatacaacgttgaaaacaaatatggcaca
aaagctttggataagatcactaaagccatcctgggatacattgaaaacaaagttccacca
ccaaaaggctatccagggggtgaatcaagattctttgcagatatgaagaaagggatgatc
gacgtgggcattttctgtaaggagccacgctttgggctcaacacagagaaagattgcacc
atcactaaattcctgaatcggattttgggcctggaggtgcaccagcagaactttctcttc
cagtacttcaccaacaactttgaatacctgattgacaaggacaaaaaggaaggcaaatat
gacatgggtatacttgatctggctccaggtaatgatgagatccatgaagagaaacaggaa
gtgttcctgactcctgggaatccccaagaaggccaggtcatcctgtataagatcagcgtg
gatcgggggatgccgtgggtcgaggcctgcagcaaagcagacaaactgactggggaaaat
gagggcttctacctttcccacaagctgcgagggagccagccgtgtgtgctgctggcagag
caaggtcgaggacgtaatctcatcgtctataagcctaacatcggcagacaagcccaccct
gaaaacctggagaatctgcagcagcggtaccgcaaggtgaccccagaagaggccaaagat
tgctgggagaatcagtttgtcttctcgttcaagaagtgcagccatgccaactggaaaggt
aagtgtaagcagttggagcagggtcaggagtgctggctgggtatgcgtctgcggcagtac
cacatgctgtgcggagctttgctgagagtgtggaagcgagtcgcagatgtcgtctctgac
atcaccaactccagcatcctgcagattgtgcgcctcaaaaccaaacagaacagcaagcaa
gtcggtataaagataccagagaactgtgttgagcgtgtgcgcagcgagctctctcagatg
gactctgaggtgaagcgagctcggcagcagaaggagcagcgcgcgcaggagcagcgcgcg
caagagcagcgcgcgcaggaacagcgcatcctccaggagcgtctcaggctcgagcagcag
aagttcctctacagccgcaagcccttcagtcgccctgctatgcatccaccaaacccccct
ccgtacccaagcccacagccaggctgggctgctctgccgcccaagagccaagctgtggac
gaagtgctggacctcacactcagtccctgcccgtcccctgagcccaaacccactcgtgcg
aacggtgtagcggcgaggctgaagttcccggagacgtttcacctggaagagctgatctcg
caggagcagcagagggcgagacgaccgcccttacatcccaacagcttagacacactgcaa
accatacacacacggaagcagcagcagcacacggtgctgagcgtgctgcagcaaaacagg
gcgaacccaggacatttgctcacgcctcagcagaactccggtcaattcaacacacagctg
ctgagacacaacgggagcaaaccggacattaacacgctaaccaaccacggcatacgcatg
caacagtttcagcagcatgtaaactctgtatcacggccacctcagttgcttcagccctcc
cctatacagcaggacgctcatcaacactcactgatgcacgtgcacacacacagtttgcat
acgcatgtacgggaaaaccaaatgccagtcagtgaacctgctccactttcactaaaactg
gttcagcagggctctctcagcagtcagtcggtcacggaaagttctgcgactccgcaggac
aacttcagtttcgacctcgaactgctcggtcatcctgcatactcgttaacctctaaaggc
cctccctccccttcgttttcttgtccttcccctgggacgtcctcgctcttctcttcagac
ccccagtcgtcttccctctcggactccatctccccttcttctctgtttgcgccttcgtcc
gaccgaccgcatcttccgttacccaatggccactgcagctcggacgcccaggatgtccac
aaggccctaatggctcgcggaagtcctgtagaccgccgccactccgtcattcagttcaat
cctttagactgggacgccacctag
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integrated database retrieval system
