Ictalurus punctatus (channel catfish): 108280554
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Entry
108280554 CDS
T04658
Symbol
rreb1b
Name
(RefSeq) ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280554 (rreb1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108280554 (rreb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
DUF629
zf-C2H2_11
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
108280554
NCBI-ProteinID:
XP_017351139
Ensembl:
ENSIPUG00000003335
UniProt:
A0A2D0T8F9
LinkDB
All DBs
Position
20:complement(2676762..2718049)
Genome browser
AA seq
1656 aa
AA seq
DB search
MESALPEKRCDEDGKASRQQEELSAPMEDKSQGEPEHAGVPGKENGTEEEREKEGAEQED
EEDGESCANSTTHTESNTGHMNGDADTAASNASPKTPGRSPSANRTGRRNQEVKDRSTFI
CPLCDKNCQTQHHLTMHIRQHNTEIGGNDHSCSICGKALSSASSLDRHMLVHSGERPYKC
SVCGQTFTTNGNMHRHMKIHDKGPNGVPASRPISPSKRRKPPKRKLSTEDDGEKTNEPPS
KKVFVVHESGEQSPAKREEDLLHCPICFKTFICKYGLESHMETHPDTALRCNLCCITFRT
HRGLLRHNSVIHKQLPTDPNGRPFIQSNPSIPLGFSDLSFIDFSCSKFPQIAQVWCETNL
RRCASKFHRFICDVCNKAFPLQVSLDLHIISHKDNDAEARKQEDDTISDTAKDSGDSKEI
PKRVGSAPQEASVSLNGKKDFMECLGLQHSSLAKPEQTAEEKQQEILDSIRFIRVEPSAT
NLPQETNSNLGLCLLDPLSLQGLNKGNGLSLLSLQPLQGGLVVRPVSQTGVELADIQQIL
KMAAAMPSQMTLPLLPKGPESPLQAEPKQMTPLKPKPLVTPRSSMGTSTPPPPVMNAQQA
SSGCISPSLPPPTAQLLISKQSPNTPSSSTSSSPTNWENAHLVGDGTGATIMTTGDIKQE
DVQGKEKDLRTSGGKKISKTEYPCRFCTQVFSFPGGLQAHMRAHHYGASPYKCSICTYTA
PDNATLMRHLRTHSGERPYVCRLCHYPFTVKANCERHLRKKHMKNTRKEIEKNIEYITPS
SSASGLVGGTTPDLVDPVNNGNTVCRYCGEDLKTYRALQIHLRTLNGCQRKPFECRQCGA
AFLAKRNCIHHLLKQHSEVQEREIEDHINTLVPVTAPSSVQTNSPAQSQSGKQNLSTFSE
AAVQDQPLDFSSKTLKIIHSDIKPEAASPSLSEDCSMEPIDLSIRKEPEGKKIKTEQVDT
TSVYSQEVKKELPSPSTARFLGKVSGVHASLPASMPSLASTLASDMTKPPIRLKPLLPKP
VAASNTSEMPPLASIAQIISSVSAAPVLLKTGINSEKSDGAMGGETLIDKKCSNGVASPG
SSFSCPSLDASKRRGKKRPFKDEIRDSTHVSISGFDLESSGELPSVEKMLATTDSNKFSS
FLQLRQMEPEKEKQSASEEEKEGKEDKEKVRPQSKGKKNAYSNSVQKMKCPYCPRVFPWT
SSLQRHMLTHTGQKPFPCPECDAFFSTKSNCERHLLRKHGMSNRSALQKTGSHPKTKADE
GSQGSTEGVSDAEPAVVVDAVDPKKEDKTTTNDMDLIEQAKDIATESPESRNDLESSQSV
ENVHTNTDDSEDDDDSQSNKSLDMNVAGKPTELKLAETQQEQPKAAEPAVEPEDPPSEEF
PHTCSTCKKTFRHAATLSRHQKIHLQASQNEDAGRKGRNQPAVSSQSLDTSTSPIKEAEQ
DTGAAEKEESSSVVESGAEDEEKEGQKEERNEEEEGGSSELESPGGRPDKRKKICNVCGK
RFWSLQDLTRHMRSHTGERPYQCQTCDRTFTLKHSLVRHQRIHQKTPDDRGADEADGARD
DSAMDGEDLRCSSGSDSETAPAENETSKTENGKKAEESLEMVVDPGVKEEEAATAEASRE
VQTNELDELYTKAPEPKDTADPSLKDDYGAADKPVV
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgccttacctgagaagaggtgtgatgaagatggcaaagcctctcggcagcaa
gaggagctttccgcaccgatggaagacaagtcgcagggtgaaccggagcatgcgggagtg
ccggggaaggagaacggaactgaggaagagcgagagaaggaaggagctgagcaggaggac
gaggaagatggagagtcctgtgccaactctacaacacataccgaatcgaacaccggccat
atgaatggggacgcggacacggctgcctcgaacgcgtcccctaaaacccccggcagatct
ccctctgctaatcgcaccggcaggaggaaccaggaagtgaaagatcgctcgaccttcatc
tgccccctgtgtgataagaactgccagacgcagcatcatctcactatgcatatacgacag
cataatacagagatcggggggaacgaccactcgtgcagcatctgtggaaaggcgttgagc
tcggctagttctctggatcgccacatgctggtccacagcggagagagaccctacaagtgc
tcagtgtgtggtcagactttcaccaccaacggaaacatgcacaggcacatgaaaattcat
gacaagggcccaaacggtgtcccagcctcgcgtcccatttccccaagcaagcgccgcaaa
ccccccaagaggaaactaagtacagaggatgatggagagaaaaccaatgaaccacccagt
aaaaaggtatttgtagtgcacgaatcaggggagcagagccctgccaagcgtgaagaagac
ctgttgcactgtccgatctgcttcaagacattcatctgtaaatatggtttggagtcacac
atggagacgcatcctgacactgcactcaggtgtaacctgtgttgtatcactttccgtacc
catcgaggtctccttcgtcataattccgttattcataagcagctgcccacagatcccaac
ggacgaccgtttatccagagcaacccttcgataccccttggcttcagcgatctgtccttc
attgacttttcttgcagcaagttcccccaaattgcacaggtctggtgcgagacaaatttg
cgacgttgcgctagcaaattccataggtttatttgcgatgtatgcaacaaggcctttcct
cttcaagtgtctctggatctccacataatctctcataaagacaatgacgccgaagcccgg
aaacaggaagatgacactatttcagatacagccaaagattctggagattccaaagagatt
ccaaagagagttggatcagcaccgcaggaggccagcgtaagtttaaatgggaagaaagat
ttcatggagtgccttggtcttcagcattcttcactcgctaagcctgagcagactgcggag
gagaaacagcaagaaattttagacagcattcgttttattcgcgttgagccctctgcaaca
aatctacctcaagaaaccaatagtaatcttggcctctgtcttctagatcctctctctctt
caaggcttgaacaagggcaatggtcttagccttctttctctgcagccgcttcagggtggt
ttggttgtccggcctgtcagtcaaacaggagtagaacttgctgacatccagcaaatcctg
aagatggctgccgctatgccatctcagatgactttgccactgctcccgaaaggtccagaa
agtcctctgcaggcagaacccaaacaaatgactcctctcaaacccaagccgctggtgacg
cctcgatccagcatgggaacttccacaccacctcctcctgtcatgaatgcccagcaagcc
tcttcaggttgcatcagccccagcttgccacccccaacagcccaacttcttatttccaaa
cagtccccaaacaccccttcttcctcgacgtcttcctcgcctacaaattgggagaacgca
catctagtaggagacggcacaggggcaacaatcatgactactggggatattaagcaagaa
gatgtccaaggtaaagaaaaggatctaagaacctcaggtggcaaaaagatctcaaagaca
gaatacccgtgtcggttctgtacacaggtgttctccttcccaggaggcctccaggctcat
atgagggctcatcactatggagcttctccatacaagtgtagcatttgcacctacactgct
ccggataacgccacgttgatgcggcatttacgaacacacagcggtgaacgtccttatgtc
tgccgcctttgtcactaccctttcacagtcaaggccaactgtgagcgtcatttgcgcaag
aagcacatgaaaaacactcgaaaagagatcgagaaaaacatcgagtacattaccccatcc
tcgagtgcaagcggtttagtcggtggtacgacaccagaccttgtggatccagttaataac
ggtaacacagtttgtcgctactgtggagaggatctgaagacctacagagctctacagatt
catctccgaactctcaatggctgtcagaggaaaccatttgaatgccgccagtgcggagca
gcctttcttgcaaaaaggaattgcatccatcacttgcttaagcaacactcagaagtgcaa
gagagggaaattgaagatcatataaacactcttgtacctgtcacagctccttcttctgtc
cagacaaactctcctgcccagtctcagtcaggtaaacagaaccttagtaccttctctgaa
gctgcagttcaagaccagcccttggatttctccagcaaaactttgaaaattattcattct
gatataaaaccagaggcagcttctccctctctgtcagaagactgctccatggagcctatc
gacctgtctattcgcaaggaaccggaaggaaagaaaataaagacagaacaagttgatacg
acttcagtgtatagccaggaggtcaaaaaagagcttccttccccaagtacagccaggttt
ttaggaaaggtctcgggtgtccatgcatcccttccagcatccatgcctagccttgcctct
actctggcaagtgatatgaccaagccccccatacgcctaaagccactgttgccgaagcca
gttgccgcctccaacacttcagagatgccacctctggcctccattgcccaaatcatctcc
tccgtgtctgctgccccagtgctgctcaaaacaggaataaactctgagaaaagcgatggc
gcgatgggtggtgaaacactaattgataaaaagtgttccaacggtgttgctagtcctggg
tcttctttcagttgtccttcccttgatgcatcaaaaagaagaggcaagaagaggccgttc
aaggacgagatccgtgattctacacatgtatccatcagtgggtttgacttggagtctagt
ggagagttaccaagtgtggagaaaatgctggccactactgattccaataaatttagctcc
ttcttacagctgaggcaaatggagccagaaaaggagaaacaatctgcgagtgaggaagag
aaggaaggaaaggaagacaaagagaaggttcgaccacaaagcaaagggaagaagaatgcg
tactcgaactcggtgcagaagatgaaatgtccatactgtcctcgggtgttcccttggacc
agctctttacagaggcacatgctaacacatacaggccaaaagccgttcccttgtcctgag
tgtgatgcattcttctccacgaagtccaactgcgagcgccaccttcttcgtaagcatggc
atgtccaatcgcagcgcactgcagaagactgggtcacacccaaaaaccaaggccgacgaa
gggtcacagggaagtacagagggtgtttctgatgctgagcctgctgttgtggtagatgct
gttgatcccaaaaaagaggacaaaaccacaacaaatgacatggacttgatagagcaggct
aaagacatagccacagaatcaccagagtcaaggaacgatctagaaagctcacaatccgtt
gagaacgttcacacgaacacggacgacagtgaggacgatgatgactctcagagcaacaag
agccttgatatgaacgttgccggcaaaccaacagaactcaaactcgcagaaacgcagcaa
gagcagcccaaggctgcagaacctgcagtggaaccagaggatccaccatcagaggaattt
cctcacacatgtagtacctgcaaaaagaccttccggcatgcggccaccctcagccggcac
cagaagattcatttgcaggccagtcagaatgaagatgcaggaaggaaaggaagaaatcag
cctgcggtatccagtcaatctcttgacaccagcacctcgccaataaaggaagctgagcag
gacacgggtgcggctgagaaagaggagagcagcagcgttgtggaaagtggtgccgaggac
gaggagaaggaaggacagaaagaggaaagaaacgaagaggaagagggtggttcttcagag
ctcgaatcaccaggaggtagacctgacaagaggaagaagatctgcaatgtgtgcggcaaa
cgtttttggagcctacaagacttgaccagacatatgcgttcacatactggagaaagacct
tatcagtgccaaacatgtgaccggaccttcactctgaaacacagcctggtgaggcatcag
cgtatacaccagaaaaccccagacgaccgaggagcagatgaggctgatggagcaagagac
gatagtgctatggatggggaagatctacggtgttcttctggaagtgacagtgagactgct
cctgccgagaacgagacgtccaagactgagaacggcaaaaaagcagaggaatccctagag
atggtggttgatcctggggtcaaagaagaggaagcagccacggcagaagcttccagagaa
gttcaaacgaacgagcttgatgaattgtatactaaggccccagaacccaaagatacagca
gatcccagtctgaaggatgactatggagctgcagacaagcccgttgtctga
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integrated database retrieval system
