Ictalurus punctatus (channel catfish): 108280624
Help
Entry
108280624 CDS
T04658
Name
(RefSeq) uncharacterized protein LOC108280624 isoform X1
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
NOD2_WH
nSTAND3
AAA_25
DUF5765
Motif
Other DBs
NCBI-GeneID:
108280624
NCBI-ProteinID:
XP_053529839
UniProt:
A0A9F7QTK5
LinkDB
All DBs
Position
20:complement(16097044..16111927)
Genome browser
AA seq
1564 aa
AA seq
DB search
MQMEQYDREMCTIEERAAQSTDHLKVTIVAQGGNVFAPIFHNVQGAGCITLTQSVGGANV
SECETRDMTSVMTEYKESIVSMYAYTREYTSCPGEHVLLADRYVDPLIIQRHRVKKEREK
EMCSKGKDFFNLRTYDTNQSIGIDDLFSQEDGPNNECPKAVILQGNSGNGKSFMAQKIIL
DWAKGDLFAGIFDVVFHLRCSELNAISGDISLVELLNCREEMTQILKDKEKKVLFLVDGF
DELRRPLPERALPVRVDIQAKPAAILSSLLRGIMLKESFLLITTRSTSTKKLGKLLKCPQ
RFTEIIGFSEEGVQEYFQKFFEDTNLSNQVHDQVKTHEALYTACFSPVMCWLICNVFKQK
HNMGTRMTSGLKSTTSIFIDFVFILLEHHCQDLNQTEQFNLLKNLGQLAEEGMLKGKILF
ERQFVPEVILNLVGLPFLCTFHHREGTHVKEMFSFLHLSFQEFFAALFYVLLDKAEAETK
IKQLLSSVSDLFKMSKNSHLLPVIQCLFGLSNKKVINLINEKHQHVVSRKIGSLLEKWMH
TFVKNDMMTHFSSFTLHCLYEVNDKNVVMNIMKIWETGRAGVKILLSSSQMTDYRAAAYC
LQFCRRIRSLYLCASTMQTLKMMETALSRCYELHLTVNYVSDDDAVYLISAMGKGKHLQC
LRLEDGSLSDHSVQMIMSTLPKQRSVGDVHLTVKAINHNNTEILMNFHKCLKASGQFSLK
VATLKNQEESLCSHFAIHNYNLYEITIKHNVVESSVKCGLALVYLSVAFDSVISHNDMKH
LLRISYNLKEIPQFEEHVDALLSFLHSIPGLTTVKLDAKNLSLKSASKILTFSQNRPSVG
RHSIRFDVDSLRGINEEDICSLSLFTDDLVYVDGVILHLKLKVHSSSLQDAYETEFKAIL
LQLSLTFPPMEGATVNWEVLFKMSSHLMKSNQRTCFSLDKQMSTIFSVLQSVPSLTEVKL
HLRSLPENWAAEMIYFLQACSSLPFFELRVGNGGETLGMIRGEALRSSDKNSILSFGCRH
LDYHDYHGWISTPGYMAGDVHRVLPCITLTITNNTDFFNNSWTTFFHHYNQLKAMTKLCP
EYDQCLDELLSVMNTIPALKEIELALRFFTAHGASSILHLIQTSSSLCKTDVMLSRQKRR
DRADEQNAREDWKSFQSDDEGDSVYSDISDSNRSAEFSSGSYGTDVEDYGDTVYLPRQLS
LNSEIENYDLDLCSELRVRKNARNECKLSLRCSGSNPDTKAVFAYISVIVSEYSGDTEIN
WSSFFQSYYGTKGLTERNPYFAEKTDALLSFLHVVPGLEEVEFGIHSLTESWAPRILFLC
HANPNICSIRLLLENAQQNDDSACSSLTIKRNFIDSMVTLKIDMLSNTTIPSLIHLKLPC
SEISNLDGAGLLYRLRCLEGLNDTSQEYNMQLNELISFLRSVPNLQKLKLQIENLTTIWV
TRLLSLKTCHSLRKIFLTTLSDDMLMEEAISELKKNWTCQECVVVITGLRCSNPTAKCSK
QNWHQECNRNMKLSFCGGQYSEEPLMYGQCETDSESEESKYYRFECYPDVIEVDEEEDGD
VFID
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggagcagtatgatagggagatgtgtactatagaagaaagagctgcacaatca
actgaccacttaaaagttactattgtggctcagggtggaaatgtttttgctccaattttt
cataatgtacaaggagcagggtgcattaccctcacacaaagtgttggtggtgcaaacgtg
tcagaatgtgagaccagagatatgacctctgtgatgacagagtataaggagtcaatagtg
tccatgtatgcatacactcgggaatatacctcctgtcctggtgagcatgtgctcctagca
gatcgttatgttgatccactgatcattcagagacacagagtgaagaaagagagagaaaaa
gaaatgtgctccaaaggaaaggactttttcaacctcaggacatatgataccaaccaaagc
attggtattgatgacttgtttagtcaagaggatggtccaaacaatgaatgtccaaaagct
gtcattctccaaggaaattctggaaatggaaagtctttcatggcacaaaaaatcattctg
gactgggccaagggagatctctttgcagggatctttgatgtagtctttcaccttagatgc
tcagagcttaatgctatttctggggacataagtctggtggaacttctaaactgcagagaa
gaaatgactcagatcctaaaagataaggaaaagaaagttcttttcctggtggatgggttt
gatgagctcagacgtcctctgcctgaaagggcattgcctgtcagagttgatatccaggct
aaacctgctgccatcctgagctcccttttgaggggaatcatgttaaaagagtccttcttg
ctgatcactacaaggtcaacatctacaaaaaaattaggaaaactgctcaagtgtccacaa
cgctttactgagattattggcttttctgaggagggagtgcaagaatattttcaaaagttc
tttgaggacacgaatctttcaaatcaagtgcatgaccaagtaaagacacatgaggctctc
tacacagcttgcttcagccctgtaatgtgctggcttatctgcaatgtctttaagcaaaag
cacaacatgggtacaagaatgacaagtggattgaaaagtaccacctccattttcattgat
tttgtgtttatcctgcttgaacatcattgccaagatttaaatcaaactgaacagtttaac
ctgctgaagaaccttggccagcttgctgaagaaggaatgcttaaaggcaaaatcctattt
gaaagacaatttgttcctgaggtgatcttaaatctggttggccttcctttcctctgcact
tttcaccacagagagggaactcatgtgaaggaaatgtttagttttttgcatcttagcttt
caagagttctttgctgcactcttctacgtcttactcgacaaggcagaggctgagacaaaa
atcaagcaactgctatcatcagtttcagatctgtttaaaatgtccaaaaattcccatttg
ctaccagtcatccaatgtctttttggactctccaacaagaaagtgatcaacttaatcaat
gaaaaacatcaacacgtagtgtctcgaaaaattggttccctgctggagaaatggatgcac
acatttgtaaaaaatgatatgatgacacatttcagcagtttcacccttcactgcttgtat
gaggtcaatgacaagaatgttgttatgaatattatgaaaatttgggaaacagggagggct
ggggttaaaattttgctgagttcttcacagatgacagactaccgtgcagcagcatactgt
ctgcagttctgtagacgcatcagaagcctgtatctgtgtgcaagtacaatgcagactcta
aaaatgatggaaacagcactgagcagatgttatgaactacatttaacagtgaattatgtg
tcagatgatgatgcagtctatctgatctcagctatgggaaaaggaaaacatcttcaatgt
ctgaggttagaagatggtagtctgtctgaccacagtgtacagatgatcatgagcactttg
cccaagcaaagatctgttggtgatgttcatctcacagtgaaggccattaatcacaacaac
actgaaatcctcatgaactttcacaaatgtctgaaggcttcaggacaattcagcttgaag
gtggctactttaaagaaccaagaggaaagcctttgctcacattttgcaatacataattac
aacttgtacgaaataactattaagcacaatgttgtggaatcctctgtgaaatgtggactg
gctcttgtgtacctctcagtggcctttgactcagtgatatcccacaatgacatgaaacat
ctccttcggatatcatataatcttaaagaaattcctcagtttgaggagcatgtagatgca
cttctgtctttcctccattctatacctggtttaactacagtgaagctggatgctaaaaat
ttgagtctgaaaagtgcttcaaagatcctcactttctcccaaaacagacccagtgttgga
cgtcattccattcggtttgatgtggatagtctcagaggtatcaatgaggaggacatctgc
tctctgtcattgttcacagatgatcttgtttatgtggatggtgtgatactacatctgaaa
ttaaaagtgcacagttcaagtcttcaggatgcatatgaaactgaattcaaagcaatactc
ctgcaactctcactgacatttccacctatggagggtgccactgttaactgggaagtttta
ttcaaaatgagtagccacctgatgaaatcaaatcaaagaacatgtttctccttggacaag
caaatgagcactatcttttcagtcctccaatctgtgccatctctaacggaggttaagtta
cacttgagaagcttacctgagaattgggcagctgaaatgatttattttctccaggcctgt
tctagtctaccattctttgaattgagagtgggcaatggaggtgaaactctgggaatgatc
agaggagaagccctgaggtcttctgataaaaattccatactgtcttttggatgccgtcat
ttggattatcatgactatcacggctggatatcaacaccaggttatatggcaggtgatgtt
cacagagtgctgccctgtatcaccctcaccataacaaacaacacagatttcttcaacaat
tcttggacaacattcttccatcattacaatcagcttaaagcaatgactaagctatgtcca
gagtatgatcagtgcctggacgaattgttatctgtcatgaacactattcctgctctgaaa
gagatagagctggcattgagatttttcacagctcatggcgcttccagcattctgcacctt
attcagacctcttccagtctgtgtaagactgatgttatgctgtcaaggcaaaaaaggaga
gatcgtgctgatgaacagaatgccagggaagactggaaaagtttccagagtgacgatgaa
ggggacagtgtctattcagatatcagtgactcaaacagatcagcagaattcagttctggg
agctatggcacagatgtggaggattatggggacactgtatacttaccaagacagctcagt
ttgaattcagaaatagaaaactatgacttggatctctgctcagagctaagagtaaggaaa
aacgccaggaatgaatgcaagttgtccttgagatgtagtggctccaatcctgatacgaaa
gcagtttttgcatacatttcagttattgtatctgaatattcaggggacactgaaatcaac
tggagtagcttctttcagtcttactatgggactaaagggttaactgagagaaacccatac
tttgctgagaaaacagatgccttgctgtctttcctgcatgttgtacctggactggaggag
gtggaatttggcatacacagtctaacagagagctgggctcctaggatcctctttctctgt
catgcaaaccccaatatttgtagtatccgtctgctgttggaaaatgctcagcaaaatgat
gacagtgcctgctcatctttaaccattaaaagaaacttcatagactccatggttactttg
aaaatcgatatgctaagcaacaccactataccatccctcattcacctcaagttaccatgt
tctgagatcagcaacctcgatggagctggtcttctttacagactgaggtgccttgagggt
ttaaatgacacgtcccaagagtacaacatgcaattaaatgagctgatctcattcctccgc
tctgttcctaaccttcagaaattgaaattgcagattgagaacctaactacaatctgggtt
acaaggctgctttccttgaaaacctgccacagtcttagaaagatctttttgactacctta
tcagatgacatgttaatggaggaggcaatctcagaacttaaaaaaaattggacatgccag
gagtgtgttgtggttattacaggactgagatgcagcaaccctactgcaaaatgttcaaag
caaaactggcatcaagaatgcaacagaaatatgaaactctcattctgtggaggccagtat
tctgaggagcccttgatgtatggacagtgtgagacagacagtgagagcgaagagagtaaa
tattacaggtttgagtgctatcctgacgtaatagaggtagatgaagaggaagatggagat
gtcttcatagattga
DBGET
integrated database retrieval system
