Ictalurus punctatus (channel catfish): 108280632
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Entry
108280632 CDS
T04658
Name
(RefSeq) protein IWS1 homolog isoform X1
KO
K17498
transcription factor SPN1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108280632
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108280632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
108280632
NCBI-ProteinID:
XP_053529622
UniProt:
A0A9F7TDY4
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Position
20:559597..566602
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AA seq
655 aa
AA seq
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MDGEEDFSGNHSDDGSGTPVQDEHAMASDAEDERAESHHSEDEGSDREGPASSPAAPVDD
SESEHEDRTGGGANSGDDDGGGGGGGGGGDDDEGSPRKQRGSMSDTEDQHKEQDSESENE
ELQKGRSHDSDSDESGGEKVKQRDSDGEERRKEDGERRKHAIQSDSEEEEDRKPKDEAGS
EQEDGRARQIRSDSDDDDEQPVKRKKAILSDSEDEDEPKAVKKRRAMSDSEEGSEAPDKT
VAAKLRELGSDSEDEEESRTKMDTGKKDEKTLFGSDSDSDNDVEEKMIADIFGESGDENE
EEFTGFNQEELEGQKQQSQAAGQKAEMDDSDSDDDVDRGKDMSFMSDFELMLAKKKAQSG
KRRRHRDGGTFISDADDVVSAMITKMNEAAEEDRTLNSQKKPALKKLMLLPTVVMHLKKQ
DLKETFIDSGVMMAIKEWISPLPDKSLPALKIREELLKILQELPSVSQETLKMSGIGRAV
MFLYKHPKESRPNKDLALKLINEWSRPIFGLSSNYKCMTREERQQRDLDQQIAPRRRLRE
PQTVAREEEPDVFGPQLSSGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDY
VVRPKWNVETDSNRGPVRKSLSRVDKQMRRFADIRRLTKTGHAVKISVEGNRMPL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaggaggatttttcagggaatcactcagatgatggtagtggcactccagtg
caggacgaacacgcgatggcctccgacgccgaagacgagagagcagaatcgcaccactct
gaggacgagggcagtgacagagaaggtcctgcctccagtccagcagctcctgtggacgat
agcgaatcagaacacgaggaccgaacagggggaggagccaacagcggtgatgacgatggt
ggtggtggtggtggtggtggtggtggtgacgatgatgaaggctcccctcgtaagcaaaga
ggaagcatgtcagacactgaggatcagcacaaagagcaggacagcgaatcagaaaacgag
gagctgcagaaggggcggagccatgattcagactcggacgaatcaggcggagagaaggtg
aaacagagggactcggacggagaggagcgcaggaaagaggatggagagcggaggaaacat
gcgatacagtctgacagcgaggaagaggaggacaggaagcctaaagatgaagcaggaagt
gagcaggaagacgggcgagctcggcagatccgctctgacagtgacgacgatgacgagcaa
ccagtgaagaggaagaaagcgattctctccgacagcgaggacgaggacgaaccaaaagca
gtgaagaagaggagagccatgtcagatagtgaggaaggctcggaggctcctgataagacg
gtcgccgctaaactcagagagcttggctcagacagcgaggatgaggaggagagcaggacg
aagatggacacggggaaaaaagatgagaagacgctgtttggcagcgacagtgactcagac
aacgatgtggaagagaaaatgatagcggacatatttggagagtcaggtgatgagaatgaa
gaggagtttacgggctttaaccaggaggagttagagggccagaagcagcagtctcaggct
gcaggacagaaggcagagatggacgactctgactcggatgacgatgtggacagaggaaaa
gatatgtcgttcatgtctgattttgaactcatgttagcgaaaaagaaagctcaaagcggt
aagcggagacggcatcgagacggaggaaccttcatcagcgacgccgacgatgtcgtcagt
gccatgatcaccaagatgaacgaagctgctgaggaggatcggacactgaacagtcagaaa
aagccggctctgaaaaagctgatgctcctgcccaccgtcgtcatgcatttaaaaaagcag
gatctgaaggagacgtttatagacagcggtgtgatgatggcgattaaagagtggatcagt
cctcttcctgataagagtcttccggccttgaagatcagagaggaactgctgaagatcctg
caggagttacccagtgtgagtcaggagactctgaagatgagtggaatcggccgagccgtc
atgttcctctacaaacaccccaaagagtcgcgacctaacaaagacctcgctctcaaactc
atcaatgaatggtctcggcccatctttggcttgtcgtctaattataaatgcatgacgagg
gaggagaggcagcagagagacctcgatcagcagattgccccccgccggagactcagagag
cctcagacggttgcaagggaggaggagcctgatgtctttgggccccaactcagctcagga
ggtcagactcctcgcagagatctggagaaagtgttaactggagaggagaaagcgttgcgg
cctggtgaccctgggttctgcgcgagggcgcgtgttccgatgccctccaataaagactac
gtggtgcgacccaagtggaacgtggagacggattcaaaccggggtcctgtgaggaagagt
ttatcacgtgtagataaacagatgcgacgctttgctgatatccgccgcctcacgaagacg
ggtcacgcggtgaagatcagcgtcgaaggcaaccgcatgcctctctga
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