Ictalurus punctatus (channel catfish): 108280644
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Entry
108280644 CDS
T04658
Symbol
mybpc2a
Name
(RefSeq) myosin binding protein Ca isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108280644 (mybpc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108280644 (mybpc2a)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108280644 (mybpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
V-set
FN3_DSCAM-DSCAML_C
Ig_CYK3_C
RsgA_N
IL8
Flavi_NS2B
Motif
Other DBs
NCBI-GeneID:
108280644
NCBI-ProteinID:
XP_017351346
Ensembl:
ENSIPUG00000009289
UniProt:
A0A2D0T913
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All DBs
Position
2:38579180..38618977
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AA seq
1128 aa
AA seq
DB search
MPEPKKPAPTKQEAAPPAEVDEGCGDELPEDDHVPGDERQISGLIVEKPQSATATKGKNI
TFVAKVDSSNLLRKPALKWLKGKWLDLGSKAGKHLQFKEAYDRNTKIYTYEMTIVKVVEG
DAGGYRCEVTSKDKCDSCTFEVTVEAAQEAQQTNILEAFKRSGDAGEDAGDLDFSGLLKK
RERKQKEEPEVDVDVWEILKNAKPCDYEKIAFEYGITDLRGMLKRLKAMKKHVEPKKSDA
FLKKLDPAYSVEKGKKIQMSVELTDPNQQVKWLKNGQEIKPSAKYVFESIGGIRKLTINK
CTLSDDAAYECVVGEEKCFTEVFIQEPPVTITKLLDDIHVVVGDKVEFEVEVSEEGASVK
WMKDGVELSRDGKYRIKKEGKKHWLTINEATKEDIGTYYVYTSGGQSKGELEVEDKQLEV
LQSIADLTLKAAEQAVFKCEVSDDKVTGKWFKDGVEVIPSNRIKMSHIGRIHKLTIDDVK
PEDAGDYTFVPDGHALSLSAKLNFLEIKIDYVPRQDPPKIHLDTTGSLVNKNTIIVVAGN
KLRLDVEITGEPAPTVCWKKGDNEMTASEGRVRVESRANLSSFVIEGAERSDEGLYTITV
TNPAGEDKAEVMVRIVDVPDPPENVRCTGVGEDTASILWDAPKFDGGSLLKGYLMERKKK
GSSRWTKLNFDIYESTVYEAKKMIEGVMYEMRVFAVNSIGISQPSAVSKPFMPIAPTSEP
TRLMVDDITDNTCAIKWRPPERIGAGGVDGYIIEYCIEGGSEWVQANETPVDKISYRVRG
LQIGEKYLFRVKAVNVAGLSPPAEIKQGVTIREITENPRIRLPRQLRTKFIRKVGEKVNL
VIPFQGKPHPVVTWFKDDGPLDPKLVNIRTTEVDTILFIRSATREHSGKYTLSVQIENME
DRATIEIQVVEKPGPPVSIVVTDVWGFNAALEWKPPKDNGNSEITGYTIQKADMKTKEWF
TVYEHHRRPSCTISDLVMGNEYTFRIFSENICGLSEEAGLSKNTAVISKTGLQYKTKPFK
ELDMSRSPKFITPLVDRCVIAGYNAAISCAVRGCPKPKIIWMKNKTIICGDPKFLMQNNQ
GVLTLNIRRPGLFDGGMYTCKAVNDFGEDEVQCKLEVRVVTEKDGAKK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccgaagaagccagctcctacaaaacaggaagcagctcctcctgctgaagtg
gatgaaggatgtggggacgagttgccagaggatgaccacgtgcccggagatgagcgacag
atatctggcctcattgtggagaagccccagagcgccacggcaaccaaagggaaaaacata
acgttcgtagccaaggtggactcgtcaaatcttctgaggaagccggcgttgaagtggctg
aaagggaagtggttggacctgggcagcaaagctggcaaacacctgcagtttaaagaagcc
tatgacaggaacaccaagatatacacttatgagatgaccatcgtgaaggtggttgaggga
gatgcgggaggctatcgctgtgaggtcacgtccaaggacaagtgcgacagctgcactttt
gaggtcactgttgaagctgcacaagaggctcagcaaaccaacattctggaggccttcaaa
cgatcgggagatgcaggagaggacgctggagatctggatttcagtggtcttcttaagaaa
agagagaggaagcagaaggaggagcccgaggtggacgtggacgtgtgggagatcctaaag
aatgcgaaaccctgcgactacgagaagatcgcattcgagtacgggatcactgacctgcga
ggaatgctgaagagactgaaggcgatgaagaagcatgtggagcctaaaaagagtgacgcc
ttcctaaaaaagttggaccctgcgtactcggtggaaaaagggaagaagatccagatgtct
gtggagctgacggatcctaatcagcaggtcaagtggctgaaaaacgggcaggagatcaaa
ccttcagcaaagtacgtgtttgagagtatcggggggatccgaaaactcaccatcaacaag
tgcacgctgtcggacgacgctgcatacgagtgtgtggtcggggaggaaaagtgcttcact
gaggtctttatacaagagcctccggtcaccatcaccaagctgctggatgacatccatgtt
gtggtgggggacaaagtggagttcgaggtggaagtgtccgaagaaggagccagcgttaaa
tggatgaaggatggagtggagttgagtcgggacggaaagtatcgaattaagaaggaaggg
aagaaacactggctgaccatcaacgaggccaccaaggaggacattggaacgtactacgtc
tacaccagtggggggcagtcgaagggagagctggaggtggaagataagcagctggaggtg
ctgcagagtatcgctgatctgacgctgaaggccgctgagcaggccgtgtttaaatgtgag
gtttctgatgacaaagtcacggggaagtggtttaaggatggagtggaggtcatcccgagt
aaccgcatcaaaatgtcacacatcggcaggatccacaagttgacgattgatgacgtgaag
ccggaggacgcaggagattacactttcgtccctgacggccacgcgctctccctttcggct
aaactcaacttcttagaaatcaagatcgactatgttcctcgtcaggatccaccgaaaatc
cacctggacaccacgggaagtctggtgaacaagaacaccatcattgtggtggcggggaat
aaactgcgtctggatgtggagatcacgggagaaccggcgcccaccgtctgctggaagaaa
ggagacaacgagatgacagcctctgagggacgagtgcgtgtggagagcagggcgaacctg
agcagttttgtgattgagggagcagagaggtcggatgaaggactttacaccatcaccgtg
accaatcctgcaggagaggacaaggccgaggtcatggtcaggatcgtggatgttcctgat
ccaccagagaacgtgcgctgcacaggcgtgggtgaggacacggcctccatcctctgggac
gcgcccaaatttgatggtggttcactacttaaaggttatctgatggagaggaagaagaaa
ggctcatccaggtggaccaagctgaattttgacatctatgagtcgaccgtgtatgaagcg
aagaagatgatcgagggcgtgatgtacgagatgagagtgttcgccgtcaacagcatcggg
atctcccaacccagtgccgtctctaaacccttcatgcctatcgccccgacaagcgagccg
acccggctgatggttgatgacatcacagacaacacgtgtgcaattaagtggcgtcctccg
gagaggatcggcgccggtggtgtggacgggtacatcatcgagtactgcatcgaaggaggg
agcgagtgggtgcaggccaatgagactcctgtagataagatcagttatcgtgttcgtgga
ctgcaaattggagagaaatacctgttcagagtgaaagcggtgaacgtcgcaggtctcagc
ccaccagccgagatcaaacaaggagtcaccatccgggagatcaccgagaaccccaggatc
cgtctgcctcgtcagttgaggactaaattcatcaggaaggttggggagaaagtcaacctc
gtcattccctttcagggaaaacctcatccagtagtgacgtggtttaaggatgacggtccg
ttggacccaaaactggttaacatccgcaccactgaggtggacaccatcctgttcatcagg
agcgccacccgagaacactcaggaaaatacacactctccgtccagatcgagaacatggag
gacagagccaccatcgagatccaggttgtagagaagcccgggccacctgtcagcatcgta
gtgactgacgtgtggggttttaacgctgctctcgagtggaagccgcccaaagacaacggc
aacagcgagatcacggggtacaccatccagaaagcagacatgaagaccaaggagtggttc
acagtgtacgaacaccaccgcaggccgagctgcaccatctctgaccttgtgatggggaac
gagtacacgttccgcattttcagcgagaatatctgcggcctgagcgaggaggcggggctt
agcaagaacacggccgtcatctccaaaacaggtcttcaatataagacgaaaccatttaaa
gagttggacatgagcaggtcccccaagttcatcacgccccttgtggacagatgtgtcatt
gcaggctacaacgcggccatcagctgcgctgtccgcggctgccccaagccaaagatcatc
tggatgaagaacaagacaataatctgcggcgatcccaagttcctcatgcagaacaaccag
ggcgtcctgactctgaacatccgcaggcccggcctgtttgatggagggatgtacacgtgc
aaggccgtcaacgacttcggcgaggacgaggtgcagtgcaagctggaggtccgagtcgtc
acagagaaggatggagcgaagaaatga
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