KEGG   Ictalurus punctatus (channel catfish): 108280692
Entry
108280692         CDS       T04658                                 
Symbol
cldnf
Name
(RefSeq) claudin-3
  KO
K06087  claudin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03272  Virion - Hepatitis viruses
ipu04382  Cornified envelope formation
ipu04514  Cell adhesion molecule (CAM) interaction
ipu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    108280692 (cldnf)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    108280692 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108280692 (cldnf)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108280692 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ipu03037]
    108280692 (cldnf)
   04147 Exosome [BR:ipu04147]
    108280692 (cldnf)
Cilium and associated proteins [BR:ipu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   108280692 (cldnf)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   108280692 (cldnf)
  Exosomal proteins of colorectal cancer cells
   108280692 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin DUF4064
Other DBs
NCBI-GeneID: 108280692
NCBI-ProteinID: XP_017351490
Ensembl: ENSIPUG00000006594 ENSIPUG00000006610
UniProt: A0A2D0TA08 W5U9G4
LinkDB
Position
20:complement(6065819..6077439)
AA seq 413 aa
MVSAGLQMLGTALAIIGWILTIVTCALPMWKVTAFIGSNIVTAQINWEGIWMSCVVQSTG
QMQCKVYDSMLALSSDLQAARALCVISILLGVMGILLAIAGGKCTNCVEDESSKAKVGIT
AGVVFIVCGILCLIPVCWSANSIISDFYNPLVPGAQKYEIGASLFKMGRIAKEVWGQTLC
FIGLIGLCLTCGLPMWRTTYFIGANIVTGQIVWDGLWMNCVMQSTGQMQCKIQSSVMSLT
QDLQAAQALIVIAILIAFAGILMTFIGAQCTSCLKNESTMAKLVICGGVLCIVAAVVCLI
PVCWSAAFTITDYSNVLVPTSQKREIGGSVYIGWGTSFVLLLGGIILCTSCPPNDMQQNN
PNTYPYQGPFMGPAGHYMPPKTYPPSVTYSGTYVPGKPYVAPSTYSAVPRQYM
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggtatctgccgggctacagatgttgggcacagccctggccatcattggctggatcctg
accattgtgacttgtgccctgcccatgtggaaggtcacagctttcattgggagcaacatt
gtgacagcacagatcaactgggagggcatctggatgtcctgcgtggtgcaaagcactgga
cagatgcagtgcaaggtctacgactctatgttggctctcagctcggacctgcaggccgcc
cgcgcactctgtgtcatttccattttgcttggtgtcatggggatcctcctggccatcgct
ggtggcaagtgcaccaactgtgtggaggatgaaagctccaaagcaaaggtgggcatcaca
gcgggtgtggtcttcatcgtctgtggtatcctgtgtctgattcccgtctgctggtcagcc
aacagcattatcagtgatttctacaatcccttagtgccgggtgcacagaagtatgagatc
ggagcttctctcttcaaaatggggagaattgccaaggaggtgtggggccaaacactgtgc
ttcatcggattgattggcttgtgcctaacgtgtggcctacccatgtggcgtacaacctat
ttcatcggtgccaacatcgtgacaggccagattgtctgggacgggctgtggatgaactgt
gtgatgcagagtacgggtcagatgcagtgcaagatccagtcgtccgtcatgagtctgacg
caggacctgcaggcggcgcaagccctcatagtcatcgccattttgattgcttttgctggc
atactcatgacatttattggtgcacaatgtaccagttgcttgaagaatgagtccaccatg
gccaaattggtcatttgtggaggtgtcctatgtattgtggctgctgttgtgtgcctcatt
cctgtctgctggtcagcggcattcacgatcactgattacagcaatgttctcgtacctaca
tcgcagaaaagggagataggtggttccgtatacatcggctggggaacttcattcgttctt
cttcttggagggatcattttgtgcacctcttgtccaccaaatgatatgcagcagaataac
ccaaacacgtatccctaccaagggcctttcatgggaccagctggacactatatgcctcca
aaaacatatccacccagcgttacatattctggaacatacgtaccgggtaaaccatatgtg
gctccgagcacttactcagccgttccaaggcaatacatgtaa

DBGET integrated database retrieval system