KEGG   Ictalurus punctatus (channel catfish): 108280715
Entry
108280715         CDS       T04658                                 
Name
(RefSeq) perforin-1
  KO
K07818  perforin 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108280715
SSDB
Motif
Pfam: MACPF C2 EGF_PRF1
Other DBs
NCBI-GeneID: 108280715
NCBI-ProteinID: XP_017351542
Ensembl: ENSIPUG00000008649
UniProt: A0A2D0T9J7
LinkDB
Position
2:39202793..39209116
AA seq 588 aa
MLQTLLIWAVFATTLPPPTCQRCFKANESQCDNADFTPGSDLAGEGFDITTMQRKGAFVL
DMSSWLQKDKSCTLCKNPYMGGKTQKLPVSVVDWRPSQKCSTKLSSSVYQSSEALVSAST
SSVENNWQSDLQITTPKVQGSLMLAGSNSKLADYSMKKTKNDKFSFTSHDVICGYYRYRV
SNRPLLHPELSDELGSLPEIYDESSKYLYYKLIDKFGTHYISKVTLGGEVRSVTSIKECE
ASLQGLSVDDVKMCLDVEASVSMGIASSLQTEAHHCKKTKEKTMNKKSFASSFSDRETNV
IGGYTQSVDLLFSANNDPKAYKEWITSLPAHPDVLSYSLTSLHELLPAKQQIRAHLRTAI
KDYILQRGLLKNCTSPCKTGVKTNPNEPCSCSCHNKPDVALNCCPTQKGFAEVTITAIRA
TGLYGDYWTQTDGFVKILLNGRTNRGQTSVIWNNDSPTWNQQFHLGTVDLTHFSSVKMEV
WDEDSDSDNDLLGACNAPLKSGVKKDVCALNHGVLYYKVEVKCIHGLAGSSCMEYKPSPM
DAQLEKVYVSRNARPIPRGMLLEMGVLLDERIPRFNQSNIRKAKGLEL
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgctgcagacacttctgatttgggcagtctttgccacaactctccctcctccaacctgc
cagcgttgcttcaaggccaatgagtctcagtgtgacaatgcggacttcactccaggatcc
gacctagcaggagaaggctttgacatcaccaccatgcaacggaaaggggcctttgtcctt
gacatgagctcctggctccagaaggacaagtcctgcactctgtgtaaaaacccctacatg
ggaggtaaaacacagaagctcccggtttctgtggtggactggagaccaagtcagaagtgc
agcacaaagttatccagctccgtctatcagtccagcgaggccctggtcagcgccagcacc
tcctctgtcgagaacaactggcagtcagacttgcaaataacaactccaaaagtccaggga
tcactgatgctggcaggcagtaactccaagctggccgattattcaatgaagaagaccaaa
aacgacaagttcagcttcaccagtcatgatgtcatatgtggatactacagatacagggtt
tcgaaccgcccactcctgcacccagagctaagtgacgaattaggaagtctccccgagata
tacgatgagtcatcaaagtacctctattacaagctgattgacaagtttggtactcattat
atctcaaaggtgactctgggtggagaggttcgctctgtgaccagcatcaaggagtgcgag
gcgtccctgcagggtctgagcgtagatgacgtgaagatgtgtctggacgtggaggcttct
gtcagtatgggaatagcttcaagtctgcagactgaggctcatcactgcaagaaaaccaag
gaaaagactatgaataaaaagagttttgctagcagcttcagtgacagagaaacaaatgtg
attggtggctacactcagagtgtcgacctccttttctcagcaaataacgacccaaaggcc
tataaggagtggatcacatctctgcctgctcaccctgatgtgctgtcctactcgctcacg
tcccttcacgagttgctgccagcgaaacaacaaatacgagcgcatttgcgcactgccatc
aaggactacatcctccagaggggcctgttgaaaaactgcacaagcccatgtaagaccggt
gtgaagaccaaccccaatgaaccgtgcagttgcagttgccacaacaaaccggatgtggcc
ctcaactgctgcccaactcagaaaggatttgctgaagtcaccataactgcaatcagagcc
acgggtttatatggagattactggactcagacggacggattcgtcaagatcctcctcaat
ggacggaccaacagaggccagacgtccgtgatctggaataacgattcaccaacttggaac
caacaattccaccttggaactgtggaccttactcatttcagcagtgtgaagatggaggtg
tgggacgaggacagtgattcagataacgaccttctcggggcatgcaacgctccactgaaa
tctggagtgaagaaggatgtctgtgcactcaatcacggagttctctattataaagtggag
gtgaaatgcattcacggtttggctggttcttcatgcatggagtacaagccctctcccatg
gatgcacagctggagaaagtgtacgtctcccggaacgctcgcccgattcccagaggcatg
ctgctggagatgggagtgctcctcgatgagcgtattccccgcttcaatcagagcaacatt
cgcaaagctaaaggtcttgagttgtag

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