Ictalurus punctatus (channel catfish): 108280780
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Entry
108280780 CDS
T04658
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00061
Fatty acid biosynthesis
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
ipu04216
Ferroptosis
ipu04920
Adipocytokine signaling pathway
Module
ipu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108280780 (acsl3b)
00071 Fatty acid degradation
108280780 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108280780 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
108280780 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108280780 (acsl3b)
03320 PPAR signaling pathway
108280780 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108280780 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108280780 (acsl3b)
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108280780 (acsl3b)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108280780 (acsl3b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108280780 (acsl3b)
Exosomal proteins of breast cancer cells
108280780 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108280780
NCBI-ProteinID:
XP_017351676
Ensembl:
ENSIPUG00000011919
UniProt:
W5U7D6
LinkDB
All DBs
Position
20:complement(13941583..13968662)
Genome browser
AA seq
711 aa
AA seq
DB search
MKLKEDVPPLFLHIFRSMVWVYSFITFIPWYFLSGAGANQARAKRIKARSVTGNPAGPYR
AINSQKQLVSELHDGLGTLDKVFDYAVKHFSQRDCLGTREVLSEEDEVQPNGKVFKKVIL
GNYNWLSYEETFLLAQRFGSGLAALGQKPHCNIAIFCETRAEWIIAAQACFMYNFPLVTL
YSTLGGAAIAHGLNETEVTHIITSKDLLQSRLKDILLEVPRLQHIIIVDHKSTSWLGLPG
GILVHNMSSVQELGAKSESMMVQRRQPLPKDIAVIMYTSGSTGIPKGVMISHRNIIAGVA
GMAERIPNLNENDTFIGYLPLAHVLELSAELVCVSHGCRIGYSSPQTLSDQSTKIKKGSK
GDATVLKPTLMAAVPEIMDRIYKNVMTKVDEMSRVQRTLFVLAYNYKFEQISKGYSTPLC
DRLVFSKVRSLLGGNTRVLLSGGAPLSAATQRFMNICFCCPVGQGYGLTETCGAGTISEL
YDYSTSRVGAPLVCSEIMLKDWVEGGYYSTDKHTPRGEIVIGGPNVSMGYYKNEAKNKED
FFVDRNGQRWFCTGDIGEFHPDGCLTIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDN
ICAYANSEESYVIGFVVPNQKQLLALAKQKQVRGSWEEICNHHDMEKEVLSVITEAAVNA
KLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaagatgtgcctcctcttttcctgcacatctttcgctctatggtttgg
gtctactctttcatcaccttcataccctggtacttcctgtccggagcaggggccaaccag
gcccgtgccaaacgcatcaaagcgcgctcagttaccgggaatccagcagggccttaccgg
gccatcaacagccagaaacagcttgtttcagagctccatgatggattgggaactctggat
aaagtgtttgattatgcagttaaacacttttctcagagagactgtctcggtacccgagag
gtgctcagcgaggaagatgaagttcagcccaatggcaaggtcttcaagaaggtgatactg
ggtaattataactggctgtcatatgaggaaacctttctgttggcccagaggtttgggagt
ggcctggctgccctgggtcagaaacctcactgtaacattgctatcttctgtgagactcgt
gccgaatggatcatagcagcacaggcctgtttcatgtacaacttcccattggtgacgctg
tactctactctgggaggggcagcaatagcccatggtctcaatgaaacagaggtcacacac
atcatcaccagtaaagatctgctgcagagtcgcctcaaggacattttgctggaggttcct
aggctgcagcacattatcattgttgaccataagtccaccagctggcttggcctgcccgga
ggcattctggtccacaacatgtcctctgtgcaggaactgggagcaaaatctgagagcatg
atggtgcagcggaggcagccccttcccaaagatatcgctgtgatcatgtacactagcggt
tccacaggcatccccaaaggagtcatgatctctcacagaaacatcattgccggggtagct
ggcatggctgaacgtatcccgaacctgaatgagaatgacacctttattggctacttgccg
ctggcgcatgtgttggagctcagtgctgagctggtgtgtgtttctcatgggtgtcgcatt
ggatactcctcaccgcagaccctttccgatcagtcaaccaaaattaaaaagggcagtaaa
ggagatgccactgtcctgaaaccaacgctaatggcagctgttccggagatcatggaccgt
atctataagaatgtgatgacaaaagtggatgagatgagcagagtgcaaaggacactcttt
gtgctggcctacaactacaagtttgagcagatcagtaaaggatatagcactccactatgt
gaccgtctggttttcagcaaagtgcgttcattgctgggtgggaatacgcgtgtgttgctg
tcaggaggagctcctctctctgcagctactcagcgctttatgaacatctgtttctgctgc
ccagtgggacagggctacggccttacagagacctgtggagctgggaccattagcgagtta
tatgactacagtacaagccgtgttggagcgcctctggtgtgttctgagatcatgcttaag
gactgggtagaaggcggatactatagtactgacaagcacactcctcgaggggaaattgtg
attggtggaccaaatgtttctatgggttactataagaacgaggcaaagaacaaggaagat
ttttttgtggacagaaatggccagcgttggttctgcacaggagacattggagagttccac
cctgacggttgtcttacgatcattgatcgtaaaaaggatctggtgaaactacaggcagga
gagtatgtgtctttgggaaaagtggaagctgcactgaaaaactgccccctcatcgacaac
atatgtgcttatgctaacagtgaggagtcatatgtgattggctttgtggttcccaatcag
aagcagctgctggctcttgccaagcagaagcaagtgagagggtcatgggaggaaatttgt
aaccaccatgatatggagaaggaggtgctgtctgtcattactgaagctgctgtaaatgcc
aaactggagcgttttgagatccccaagaagatccgtctgagtgccgagccatggactccg
gagacaggcctggttactgatgccttcaaactcaaacgcaaggagctcaaaagccactac
caggaagacattgagaggatgtatggtggcaagtaa
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