Ictalurus punctatus (channel catfish): 108280795
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Entry
108280795 CDS
T04658
Symbol
sema6ba
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
KO
K06842
semaphorin 6
Organism
ipu
Ictalurus punctatus (channel catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108280795
NCBI-ProteinID:
XP_047018386
Ensembl:
ENSIPUG00000015591
UniProt:
A0A2D0TA00
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Position
20:16331923..16497208
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AA seq
863 aa
AA seq
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MTTHTSFLLILLAVLRLTAGSFPEEPGPLISTPAEVARRYPVFLGRAHRSYMRQEPLYIQ
TVLKVNRTLYIGARDDLYRVELDHVTGDEMFYSKKRTWESNKNDIRICRMKGKHEEECRN
YMKVLLNQHGGLFVCGTNAFNPLCANYTRDTLEMVGEPISGMARCPYDPKHANVALFAEG
NLFTGTVTDFLAIDAVIYRSLGDSPALRTIKHDSKWFREPYFVSAVEWGPHIYFFFREMA
MEFNYLEKVMVSRVARVCKGDLGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNLLQSTS
PIIRMHGRDIVLGVFSTPPNSIPGSAVCAFDMQQLARVFEGRFKEQKTPESIWTPVPEEL
VPKPRPGGCAGQGSRFSSSTSFPDEVLNFIKTHPLMDEAVPLLGHRPWIVKTMVRYQLNT
MVVDTEAGPHRNRTVVFLGSTRGTVLKFLITPGRDNPYSSTNIFLEELEGYNPERCGDDS
VQARQPLSLTLDRQSHTLLLAFHSCVVRLPVARCQLHSRCMKNCISSRDPYCGWTKGSTC
SLLRPGTRLPFVQDIEYGNTTHLGDCDGLLHESFTDEPESLVTLNLLVVAAVSAFSTGAA
LSGLAVCWIMSQKHRHCSRSESSSSGSQRKSEKERSMLGPSTSGSVLSVTDRPRPQGETL
FVMPNGWTKAGDLDPGLLPTPEQTPLQQKRPAPSLRLSDSGSGWDQSQTFLNSVGTQCPP
PPPSAIFLSSKLLGDRRHEDVIERQRYVSLSKYREHGTRPGTLLRKSAGDYNYPMTPQDS
PDRRRVVSAPSTQMEYTGEALRWTHENYVFHAVPTPGHRYTAGTGHPASLARTVLHGSRG
LMDLADFSHLLGKGGNERAPSGQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccacacctccttcctcctgattctcctggctgttcttcgattgactgccggc
tcgtttccagaggaaccaggtcctttaatctccacccctgctgaggttgccaggcgttac
cctgtgtttctgggccgagctcatcgttcttacatgcggcaggagccgctgtacattcag
acagttctaaaggtcaaccgcacactgtacattggtgccagagatgacctttaccgtgtg
gaactggaccatgtaacaggggatgagatgttctacagcaaaaagcgaacatgggaatcc
aataagaatgacatccgaatctgcaggatgaagggcaaacatgaggaggagtgccgtaac
tatatgaaggtattgctgaatcaacatggcggcctttttgtgtgtgggaccaacgccttc
aacccgctgtgtgccaattacactagagacactctggaaatggtaggagagccaatcagt
ggaatggccaggtgtccgtatgatcccaaacatgccaatgtggccctgtttgcagagggt
aacctgtttactggtacggtgacggatttcctcgctatcgacgctgtcatctaccggagt
ttgggagatagccctgctctccgcacgatcaaacacgattccaagtggtttcgagagccc
tactttgtgagtgcagtagagtggggtcctcacatctacttcttcttcagagagatggcg
atggagtttaattatttggagaaggtgatggtgtcccgtgtggcacgtgtgtgtaaaggt
gatctagggggctctcagcgtgtgttagagaagcagtggacgtcatttctgaaggcaaga
ctgaactgctctattccaggagactctcacttctactttaacctgctgcagtccaccagt
ccaatcatacgcatgcacggcagagacattgtcctaggagttttttccactcctcccaac
agcatccctggctcagcggtgtgtgctttcgacatgcagcagctggcacgtgtgttcgaa
gggaggttcaaggaacagaagactccggaatcaatttggactccagttccagaggagctt
gtgcccaagcccaggcctgggggttgtgctggtcaggggtccaggttcagctcctctacc
tcattccctgacgaggtattaaatttcataaagacccatccactcatggatgaagccgtc
cctctgctaggacacagaccctggatagttaaaactatggtcaggtaccaactgaacacc
atggtggtggatacagaggcaggaccacacagaaaccgcactgtagtgttcctcgggtcc
accaggggcaccgttctgaaattcctcatcacaccgggtagagacaacccttactctagc
accaacatctttctggaggagttagagggctataatcctgagaggtgtggtgatgattct
gtccaggcacgccagccgttgtctctcaccctggacagacaaagtcatactcttttgtta
gctttccactcttgtgtggtgaggctgcctgtagcccgctgccaactgcattcccgctgt
atgaagaactgtatctcctctagagatccttactgtggctggaccaaaggaagcacatgt
tctctcctcagacctggtaccagactaccatttgtgcaggacattgagtatgggaacacc
acacatcttggagactgtgatggtctgctgcatgagagttttacagacgagccagagagc
ctggtgaccctgaacctgctggtggtggcagctgtttcagcgttctccactggggcggca
ctctctggcttggccgtgtgctggattatgagccagaagcaccgtcattgctctcggagt
gaatcttcctcctcgggcagccagcggaagagcgaaaaggagcgcagcatgctgggccca
agcaccagtggctcagtgctgagtgtgacagatcggcctcgccctcagggtgaaacgctc
tttgtgatgcccaacggttggacgaaagctggtgatctggacccgggactgcttcctaca
cctgaacagactccactgcagcagaaacgcccagcgccctcgctccgcctctctgactca
ggctccggctgggaccagagccagaccttcctgaactcggtaggcacccagtgtcctccc
ccaccaccctctgccatcttcctcagttctaagctccttggcgacaggcggcatgaagat
gtcatcgagcgccagcgatatgtttctctctcaaagtaccgtgagcatggaacacgccca
ggcacactgctgcggaaatcagcgggcgactacaactacccaatgacgcctcaggactcg
cctgacaggaggcgggtggtgtcggcacccagcacgcagatggagtacactggtgaggct
ctgcgctggacccatgagaactacgtcttccatgccgttccaaccccaggacaccgctac
accgcaggcacagggcatccagcaagcctcgcccgcactgttctgcacggctctcgtggc
ctcatggaccttgcggatttcagccatcttctgggcaagggaggcaacgagcgtgctcct
tcaggtcagtga
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