Ictalurus punctatus (channel catfish): 108280831
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Entry
108280831 CDS
T04658
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108280831
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108280831
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108280831
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108280831
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
108280831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
Mg_chelatase
RsgA_GTPase
AAA_7
AAA_5
AAA_16
ABC_tran
PhoH
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
108280831
NCBI-ProteinID:
XP_017351755
Ensembl:
ENSIPUG00000013991
UniProt:
A0A2D0TAR8
LinkDB
All DBs
Position
20:complement(23409435..23419033)
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AA seq
643 aa
AA seq
DB search
MLHAEDGARLECSVAVERASGASAGHGVQRRVLRRATVTLGRDEFRELVLRVQDVRGGAH
ENFALRSDFRLFMRFVKDGKCTVNFPQSNAQVLISDCPPDRLKTFLKTLSIKHEASRGTN
PVSERARMRAGVPRSFEIISPVQQKDIQKANELRSKVNAPVQVKALTERAVNRTDGRQRV
KRPRADGDASPVKALHPHKKPVLTLPVAQKLSKEQMAVLNAVLSGKNVFFTGSAGTGKSF
LLKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCLELAQRPGVLQH
WTSCKHLIIDEISMVEAEFFDKLESVARSIRRSSEPFGGIQLIVCGDFLQLPPVTKGKEK
PGFCFQARSWRKCIQVNMELTEVRRQTDRTFISLLQAIRVGRVTEEVSARLLKSASNPIE
RDGIVATRLCTHKDDVELTNENKLKQLPGPLRVFEALDSDPMLVKTIDAQSPAGQTLQLK
VGAQVMLTKNLDVHRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEVMKRERWTFKAAGG
LYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDF
DPRVVHANSDVLMFYKKLKRDRLLLQSSMNDFVGKSNKENEAC
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacgcggaggacggtgcgagactggagtgcagtgttgcagtagagcgtgcgagc
ggagcatcagcaggtcatggggttcagcgccgggttctccgccgtgccacggtcactctg
ggccgggacgagttccgggagctggtgctgcgcgttcaggacgtccgtggcggagcccat
gagaactttgctttacgtagtgacttccggctcttcatgcggtttgtcaaggacggcaag
tgcacggtgaacttcccgcagagcaacgcgcaggtcctgatctctgactgtccgcctgac
cgactgaaaaccttcctgaagaccctgagtataaagcacgaagcctcacggggcactaac
cctgtcagcgaaagggcccggatgcgggcgggtgtcccgagaagcttcgagatcatcagc
cctgtgcagcagaaggacatccagaaagccaacgagttaaggagcaaagtgaacgccccg
gtgcaggtgaaagcactgaccgagagagctgtgaacagaacagacggccgacagcgggtc
aaacgaccccgagcggacggagacgccagcccggttaaagctctccaccctcacaagaag
cctgtcctcacgttgccagttgcgcagaaactcagcaaggaacagatggcggttctgaat
gcagtattgagcgggaagaatgtgtttttcactggaagtgcaggtacggggaagtccttc
ctgttgaaaaggattgtgggatcgctgcctcctaaaagcacatacgccacggccagcacc
ggtgtagcggcctgtcatataggagggacgacattacacagtttcgcaggtatcggctcg
ggttcggctcctctggagcagtgtttggagctcgcacagcggcccggagtcctgcagcac
tggaccagctgcaaacacctcatcatcgacgagatctccatggtggaggcagagttcttt
gacaagttggagtccgtcgccaggtcaattagaagatcttccgagcctttcggaggaatt
cagctgatcgtgtgtggagattttctccagcttcctcccgtcactaaaggaaaagagaaa
cccggcttctgcttccaggcgaggagctggaggaagtgcatccaggtgaacatggagctg
acggaggtgcggaggcagacggaccgcaccttcatctcgctgctgcaggccatccgagtg
ggcagagtcactgaggaagtctctgcccggctcctgaagagcgccagtaaccccatcgag
cgggacggtatcgtagcgaccaggctgtgcacgcacaaggacgacgtggagctgactaac
gagaacaaactcaagcagctaccaggacccttacgtgtgtttgaggcgctggacagtgac
cccatgttggttaaaaccatcgacgcacagagtccagcgggtcagacgttacagctgaaa
gtgggagctcaggtcatgctgactaagaacctggatgtccacagagggctggtgaacggt
gcgagaggtgtcgtggttgacttcctaccaggaaatcaaggcctcccgagagtgcgcttc
ctgtgcggtgctgtagaagtgatgaagcgcgagcgctggacgtttaaagcggcgggaggc
ctgtacctgagccgacagcagctcccgttgaagctagcctgggccatctccatccacaag
agtcaaggcatgactctggactgcgtggagatctctctggcccgtgtgtttgagagcgga
caggcttacgtagctctctctcgagcccgcagtctggaggggcttcgtgtcatggacttc
gacccgcgagtggtccacgcgaactcagacgttctgatgttctacaagaagctgaagagg
gaccgacttctactgcagtcctccatgaatgactttgttgggaaaagcaacaaggagaac
gaagcttgttga
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