Ictalurus punctatus (channel catfish): 108280832
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Entry
108280832 CDS
T04658
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4
KO
K21970
5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108280832
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108280832
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Other ribosome biogenesis factors
108280832
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108280832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Motif
Other DBs
NCBI-GeneID:
108280832
NCBI-ProteinID:
XP_017351757
Ensembl:
ENSIPUG00000013963
UniProt:
A0A2D0TA70
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All DBs
Position
20:complement(23402665..23406951)
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AA seq
385 aa
AA seq
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MAAHTRMRFLINKFKDSVCFIQRRNRVKTKWASTRAKVPATNLALQHFDATYKKYFGELW
PSVRIGMLSEQKYGALMNNFASNADVISTLQSQGCRDFIRAGETETHELSDESEQNDHSS
TEPARISSNIQCFVFPRGDITRFKPARPDSAGLLSYYLLDAASVLPVLALDIRPGHSVLD
LCAGPGGKTLAILQTQAVRFLWANDLSGSRTARLQRTLQSFVPKELRGEDKIRVTSLDGR
KWRNMEDLEFDRVLVDVPCTTDRHSLIEDENNIFKRSRTKERQTLPLLQIELLLAGLQAT
RPGGELLYSTCSLSPLQNECVVEQALGLAQQEMDITVRVQDLGSFARLFSDTFRFAPQPA
LGELVLPHLCANFGPIYLCKLLRVS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacacgagaatgagatttttgataaacaagttcaaagactctgtttgtttt
atccagcgacggaatcgcgttaaaacgaaatgggccagcaccagagccaaagtcccagcg
actaacctggctctgcagcacttcgatgccacgtataagaaatacttcggggagctgtgg
ccgtccgtccgtatcgggatgttgtccgagcagaagtatggagccttgatgaacaacttc
gcctctaatgcagacgtgatctcgactttacaatctcaaggctgcagagacttcatcaga
gctggagaaacagaaacacacgagctctcagatgaatctgaacaaaatgatcattcttct
acagaaccggcccgtattagctcaaatatccagtgttttgtctttccgagaggagacata
actcgattcaaacctgccagaccagacagcgcaggattactgagttattatctcctggac
gcagcttctgtcctgcccgtgttggcgctggacatccggccgggtcacagtgttctggac
ctgtgcgccggtccgggagggaagacgcttgctattctgcagacgcaagctgtccggttt
ctgtgggccaacgacttgtctgggtctcgcacggcccggctccagaggacgctccagagc
ttcgtgcctaaggagctgagaggtgaagacaagatccgcgtcacgtctcttgatggtcgc
aaatggaggaatatggaagacctcgaatttgaccgagtgctagtggacgtcccctgtacc
acagacagacattccctaattgaggatgagaacaacatctttaaaaggtccaggactaaa
gagagacagacgcttcccctactgcagatcgaactcctgctggcggggctccaggcgact
cgtccgggcggagagctgctctactccacctgctctctgtctccgctgcagaacgagtgt
gtggtggagcaggcgctcggtctcgctcagcaggagatggacatcacggtgcgagtgcag
gacctcggcagcttcgctcgcctcttctcggacactttccgcttcgcccctcagccggcg
ctcggggaactcgtcctcccgcacctgtgcgcgaacttcgggccgatttatttgtgcaaa
ctgctgcgtgtcagctga
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