Ictalurus punctatus (channel catfish): 108280842
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Entry
108280842 CDS
T04658
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108280842 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108280842 (limk1a)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108280842 (limk1a)
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
108280842 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
RIO1
PDZ_6
ABC1
PDZ_2
RelB-like
Haspin_kinase
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
108280842
NCBI-ProteinID:
XP_017351775
Ensembl:
ENSIPUG00000007559
UniProt:
A0A2D0TAT3
LinkDB
All DBs
Position
20:complement(6490480..6559754)
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AA seq
660 aa
AA seq
DB search
MRLMLLCCTWTDERMGEDEAGGRLPLCAGCRQHIYDEQYLQALSTDWHTVCFRCCECSVS
LSRWYYEKDGRLFCRKDYWAKFGELCHGCSEPITTGLIMVAGEQKYHPECFTCLNCRTFI
GDGDNYALVERSKLYCGHCYYETIVTPATLPDSPCSRIPHTVTLVSIPASTDGKRGFSLS
IDQGSSPNGYTTDYNHTVRVSQVDSECISPDVKNAIHVGDRILEINGTPIRNVPLDEIDL
LIQETSRLLQLTIEHDPLDSDNPSSSFEDQVDGPSPLPERHSPVPPITQPPNHDINNLRS
RMITRSYSIDKSPCSSNSVSPMSLRKDIGRSESLRVVTNRTHRIFRPSDLIHGEVLGKGC
YGQAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNVLKFIGVLYKDKRL
NFIAEYIKGGTLRDIIKKMDSNYPWNQRVSFAKDIASGMAYLHSMNIIHRDLNSYNCLVR
ENNSVVVADFGLARLMVEDKNQDKLGKLQGVKKPDRRKRYTVVGNPYWMAPEMIHGKSYD
EKVDIFSFGIMLCEIIGRVNADPDYLPRAIDFGLNVNGFLEHYYPPDCPRSFFPLAVLCC
DLDHEKRPAFAKLEEWLEKLKMHLNMRFLLVSELEQIHLDFWQKHPPVENQLPTHREQPE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgtacctggacggacgaacgcatgggggaggacgaagct
ggtggaagattgccgttgtgtgcggggtgcagacagcacatttatgatgaacaatacctt
caggccctcagtactgactggcacaccgtttgtttcagatgctgtgaatgcagtgtgtct
ctgtcccgctggtactatgagaaagatggacgtctcttctgtaggaaggactactgggct
aagtttggggagttgtgtcatggctgctctgagcctatcaccactgggctcatcatggtt
gcaggtgagcagaagtatcacccggagtgtttcacctgcctgaactgccgcaccttcatc
ggagatggagacaactacgctctggtggagaggtccaagctctactgtggacattgttat
tatgagaccatcgtgacccctgcgaccctgcctgattctccatgctcgcgaatccctcac
acagtcacgctggtgtctattccagcctccacagatggaaagcgtggcttctctctttcc
atcgatcagggaagcagcccaaacggctacactactgactacaatcacacagtccgcgtg
tcccaggtggattctgagtgcatcagtccagatgtgaagaatgccatacatgttggtgac
cgtatcctggagattaatggcacccctatccggaatgttccacttgatgagattgatttg
ctcatccaagagaccagtcgactcctgcagctcaccattgagcatgacccccttgactct
gacaaccccagcagctcgtttgaggatcaagtggacggaccgagcccacttcctgagaga
cacagcccggttccaccaatcacacagccaccgaatcacgacatcaacaacctgcgctcc
cgcatgatcacgcgtagctacagtattgataagtcaccatgctccagtaattctgtgtca
cccatgtctctgaggaaggacattgggcgctccgagtctcttcgtgtcgtaacaaaccgc
acacacagaatcttccggccatctgatctcatccacggagaagtgctcggaaagggctgc
tacggtcaggctattaaggtgacccacagggagacgggtgaggtgatggtcatgaaggag
ctcattcgctttgatgatgagacccagcggaccttccttaaggaggtaaaggtaatgaga
tgcctggaccaccccaacgtcctcaagttcatcggggtcctctacaaagacaagcggctg
aacttcattgccgagtacatcaaaggaggcaccctgagggacatcattaagaaaatggac
agtaattatccctggaaccagagagtgagttttgccaaggatattgcatctggaatggcc
tacctacattccatgaacatcatccaccgtgatctcaactcttacaactgtttggtcaga
gagaacaacagtgttgtggtggcagactttggtcttgctcggctaatggtagaagacaag
aaccaggacaaactggggaagctccagggtgtgaagaaaccagaccggaggaagagatac
acggttgtgggcaacccttactggatggctccagaaatgattcatggaaagagctacgat
gagaaggtggacatcttttccttcggcatcatgctgtgcgagattattgggcgagtcaat
gcagatccagactacttgccacgagccatagactttggcctcaacgtgaacggtttcctg
gagcactattaccctccagattgcccccgctctttcttccccctggctgtcttgtgctgt
gacctggatcatgagaaacggcctgcttttgcaaagctggaagaatggcttgagaagcta
aagatgcacttgaatatgcgcttcctgctggtctcagaactggagcagatccatctagac
ttctggcagaagcatccacctgttgagaaccagctgcccactcatcgagagcagcccgaa
tag
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