Ictalurus punctatus (channel catfish): 108280855
Help
Entry
108280855 CDS
T04658
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108280855
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108280855
04114 Oocyte meiosis
108280855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108280855
03036 Chromosome and associated proteins [BR:
ipu03036
]
108280855
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108280855
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108280855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Nbas_N
Beta-prop_SCAP
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
eIF2A
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_DCAF4
KNTC1_N
DUF5711
WDR54
Motif
Other DBs
NCBI-GeneID:
108280855
NCBI-ProteinID:
XP_017351804
Ensembl:
ENSIPUG00000014445
UniProt:
A0A2D0TAA1
LinkDB
All DBs
Position
20:complement(24107392..24112023)
Genome browser
AA seq
494 aa
AA seq
DB search
MAHFGFENDMQNVLKLDMPITNAPMARWQRKASTSASANTSALSPSKSSNRSLSMSKTPS
RTPGKNGKNQSTPSKAGGDRFIPVRNAKQLDVASFLISKENEPVEEAAASTQTNQKAWSV
TLNGCDIDEAKILHLGGKPLNAPEGYQNNLKVLYSQVPTPVSLKKTRYISSVPERILDAP
EIRNDFYLNLMDWGRLNILAVALSEYVYLWDAATGMIVLLKKMEEENGYVTSVSWSKDGN
FLAVGTSDCKVELWDVQSQKRLRSMDGHRARVSCLNWNDHVLSSGSRSGLIHQHDVRVAN
HHLFTLRGHTQEVCGLTWSPDGRYLASGGNDNLVNIWPSTQGGAQTAMHSFSEHQGAVKA
LAWCPWQSSILASGGGTSDRHIRIWNVNSGSCVTSWDTQSQVSSLVFAPNYKELISGHGF
SHDKIFIWKYPSLAKVAELEGHEGRILNIALSPDSTTLASISSDETIRLWKCCEKDPTKK
AKPASSSIIQQHIR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcactttggtttcgagaatgatatgcagaacgtgttgaaactggacatgcccatc
accaacgccccgatggccaggtggcagaggaaagccagcacgtccgcttcggccaacacg
agcgctctgtcaccgagcaaaagctccaaccggtctctcagcatgtccaaaacgccgagc
agaacaccggggaagaacggtaagaaccaaagcacaccctcgaaggccggaggagaccga
ttcatccccgtcagaaacgccaaacagttggacgtggcgagtttcctcatctccaaggag
aacgagccggtcgaggaagcggcagcgtccacacaaactaatcagaaggcctggtccgtg
actctgaacggatgcgacatcgacgaggccaaaatcctgcacctgggaggaaagcctctt
aacgcccccgaaggttaccagaacaacttaaaggttctgtacagccaagtccccacgccc
gtgtcgctgaagaagacccgctacatatcttcggttccagagagaattctcgacgccccc
gagatcaggaacgacttctatctgaacctgatggactggggcagactgaacattctggcc
gtggctctttcggaatacgtgtacctgtgggacgcggcgacggggatgatcgtgctgctg
aaaaagatggaggaggagaacggctacgtgacgtccgtctcctggagcaaagacggaaac
ttcttggccgtcgggacgagcgactgcaaagtggagctgtgggacgttcagagtcagaag
cgtctgcgcagtatggacggtcatcgtgccagagtcagctgcttgaactggaacgatcac
gtcctatccagtggttccagatccggtttgatccaccagcacgatgtccgtgtcgccaat
catcacctgttcacgctcagaggtcacacgcaggaggtgtgcggtctcacctggtctccc
gacggtcgctatttagccagcggcggcaacgacaacctggtgaacatctggccgagcacg
cagggcggagctcagacggccatgcactcgttcagcgaacaccaaggagccgtgaaggcg
ttggcgtggtgtccgtggcaatcgagcatcctggcatcgggaggaggaaccagcgaccgc
cacattcgcatctggaacgtcaacagcggctcgtgcgtcacttcctgggacacgcagtct
caggtctcatctctcgtgtttgccccgaactacaaggagctcatctcgggtcacggtttc
tcgcacgacaagatcttcatctggaaatatccctcgctcgctaaagtggccgagctcgaa
ggccacgaaggccgcatcctgaacatcgccctcagtcccgacagcaccaccctggcgtcc
atcagctcggacgagaccatccgcctgtggaagtgttgcgagaaagatcccaccaaaaaa
gccaagcctgcgagcagcagcatcatccagcagcacatccgataa
DBGET
integrated database retrieval system
