Ictalurus punctatus (channel catfish): 108280871
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Entry
108280871 CDS
T04658
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108280871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108280871
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108280871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Motif
Other DBs
NCBI-GeneID:
108280871
NCBI-ProteinID:
XP_017351838
Ensembl:
ENSIPUG00000006536
UniProt:
W5ULA5
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All DBs
Position
20:6036925..6045274
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AA seq
250 aa
AA seq
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MSIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTPTVFINV
SKGQVAKKDDLSKAFGTDDLTEICKQILAKGELQVSDKERHSQLEQMFRDIATIVAEKCV
NPETKRPYTVSLIERAMKDIHYSVKATKSTKQQALEVIKQLKESIQIQRAHMRLRFILPA
KDGKRLKEKLKPLLKVVESEDFDDQLEMVCLIDPGCFREIDELIRCETKGKGSVEVLSLK
DVEEGEEKFE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatttacacccacaaatcagattcgcctgacaaacgtggcggtcgtgaggatg
aaaagaggaggaaaacgatttgaaatagcgtgttacaaaaataaagtgatgagctggaga
tcgggagcagagaaagatctggatgaagtactccagacccccacagtgtttataaatgtg
tcaaagggccaagtggcgaaaaaggacgatctgtcaaaagcatttggaacagatgactta
acagaaatatgcaaacagattttagcaaaaggagaacttcaggtgtctgataaggagcga
cattctcagctagaacagatgttccgggacatcgccacgattgtggccgagaaatgcgtc
aatccggagacaaagcgcccttatacagtgagcctaatagaaagagccatgaaggacatt
cactactctgtcaaagccactaagagcacaaaacagcaggcacttgaagtgatcaaacag
ttgaaggaatccatccagattcagagagctcacatgcgactccgcttcatcctgccagcc
aaagatgggaagaggctgaaagagaagcttaaacccctcttaaaggtggtggagagtgaa
gacttcgatgatcagctggagatggtttgcttgatagatccgggctgctttcgggaaatc
gatgagctgattcgctgcgaaacaaaaggcaaaggttcagtcgaggttctcagcctgaaa
gatgtggaagaaggcgaggagaaatttgagtaa
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