Ictalurus punctatus (channel catfish): 108280888
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Entry
108280888 CDS
T04658
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04382
Cornified envelope formation
ipu04514
Cell adhesion molecules
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108280888
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108280888
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108280888
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108280888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108280888
04147 Exosome [BR:
ipu04147
]
108280888
04515 Cell adhesion molecules [BR:
ipu04515
]
108280888
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108280888
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108280888
Exosomal proteins of colorectal cancer cells
108280888
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
L1 family
108280888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
108280888
NCBI-ProteinID:
XP_017351871
UniProt:
A0A2D0TAG9
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All DBs
Position
20:6100479..6102011
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AA seq
208 aa
AA seq
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MSAGLELIGIVLCVLGWLLAIVSCALPMWRVTAFIGSNIVTAQIYWNGLWMSCVVQSTGQ
MQCKLYDSTLALSQDLQAARALTVISILVVILAMLVSIAGAKCTNCIDDESSKAKVMIVA
GVLFLVAGFMQLIPVSWSANTIIREFYNPLMATPQKWELGASLYIGWAATALLIMGGSLL
CCSCPPSRMTYSASHSAAAGGYDRRDYV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggcctggaactcattgggattgtgctgtgcgtgctgggatggctcctggcc
attgtctcctgcgctctgcccatgtggagggtcacggccttcatcggaagcaacatcgtg
acggcgcagatttactggaacggcctctggatgagctgtgtggtgcagagcactggtcag
atgcagtgcaaactctacgactccacgctggcgctttcccaagatctccaagcagcccgt
gccctcactgtcatctccatcctagtggtcattctagccatgttggtgtccatcgctggg
gccaagtgcaccaactgcattgatgacgaatcatccaaggccaaagtaatgatcgtggct
ggagttctcttccttgtggctggcttcatgcagttgattcctgtctcctggtcagctaat
acaatcatcagggagttctacaatcccttaatggccaccccgcagaagtgggagctaggg
gcttcactttacatcggctgggccgccacggctctcctgataatgggaggatcgctgcta
tgttgctcttgccctccatccaggatgacttattcagcgtcccactctgcagctgctggt
gggtacgacaggagagactatgtgtga
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