Ictalurus punctatus (channel catfish): 108280908
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Entry
108280908 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108280908
04121 Ubiquitin system [BR:
ipu04121
]
108280908
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108280908
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108280908
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108280908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
FAR1_N
zf-RING_16
DUF8608
zf-RING-like
HypA
C1_2
zf-RING_Vps41
EHMT1-2_CRR
zinc_ribbon_16
DZR_2
U-box_ZFPL1
DZR
PHD
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
108280908
NCBI-ProteinID:
XP_017351898
Ensembl:
ENSIPUG00000017817
UniProt:
A0A2D0TAJ4
LinkDB
All DBs
Position
20:17763027..17783264
Genome browser
AA seq
310 aa
AA seq
DB search
MAEAPLRTRRYFCHRCSEEISPRLPDYTCPRCESGFIEELPEERSADNGSTSTSSTSDQN
RYPFENVDPTLFTFPHPYGQLALGIFGEGFDLRTGMPSEDGRDAENRREREMASRQRYGA
RQPRGRHIPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNMGMGPWGMLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADREKIKNLPTVQITEEHVGAGLECPVCKEDYTEGESV
RQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSSSS
PSNENAANNS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccttacggactcgccggtatttctgtcaccgatgttctgaagagatt
agccctcgtctcccagattacacctgtccacggtgtgagtccggcttcattgaagagtta
cccgaggagagaagtgcagacaatgggtccacatccacgtcgtctaccagtgatcagaac
cgttatccatttgagaatgtggacccgactctgtttacctttccacacccatatggccag
ctggctctgggcatctttggtgagggttttgatctccggacgggcatgccctctgaggac
gggcgcgacgctgagaaccggcgggagcgggagatggcgtcacgccaacgctatggggcc
agacaacctcgggggcgccacattccccggagacaagggacacggcacgaaggagtgccc
actttagagggaataattcagcagttagtaaatggaatcatcgccccaacagctatgcca
aacatgggaatgggaccatggggaatgctacattcaaatccaatggattatgcatggggt
gccaacggcttagacgccattataacacagttattaaatcagtttgaaaatacgggtcca
cctcctgcagacagagaaaagatcaaaaacctcccaacagttcagatcacagaggagcat
gtgggagctggtttagaatgtcctgtgtgtaaagaagactacaccgagggagagagcgtt
agacaacttccatgcaatcacctctttcacaatgactgtatagtgccctggctcgaacag
catgacacatgtccggtgtgcaggaagagcttgagcggccagaatacagccacggatcct
cctggcttatcaggaatgaacttctcaccttcctcatcctcctcctcctcttccagttcc
cccagtaacgagaacgctgccaacaactcctaa
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