KEGG   Ictalurus punctatus (channel catfish): 108280920
Entry
108280920         CDS       T04658                                 
Name
(RefSeq) splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108280920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108280920
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108280920
 Complex B
    108280920
 Complex C
   U2 SnRNP specific factors
    108280920
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus PRP4
Other DBs
NCBI-GeneID: 108280920
NCBI-ProteinID: XP_017351918
Ensembl: ENSIPUG00000019071
UniProt: A0A2D0TAL2
LinkDB
Position
20:19362919..19367544
AA seq 299 aa
MDFQHRAGGKTGSGGVASASESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDPEIGQQSLLFQIDYPEIAEGIGPRHRFMSAYEQRIEPPDRRWQYLLLAAEPYETIA
FKVPSREIDKSESRFWTHWNRETKQFFLQFHFKMEKLLPQPGGQAAPATIKRPPPLMTGL
GARPPTDAMPPPPPGGIPGMPPPPPHAPPQMSHASGMPPPGALPPHLRPPLPADGPPSN
NT seq 900 nt   +upstreamnt  +downstreamnt
atggacttccagcacagagccggtggaaagaccggcagtggcggggtggcttcggcctcc
gagagcaaccgggaccggcgagaacgcctgcgccaactcgctttagaaaccatagacatc
aacaaggacccttactttatgaagaaccatttgggctcttacgagtgcaagctgtgtctc
acacttcataataacgaggggagttatctggctcatacacagggaaagaagcaccagact
aatttagcacgaagagcagctaaagaggccaaagaggctcctgcccaaccagcgcctgag
aaagtaaaggtggaagtgaagaagtttgtaaagatcgggcgaccaggttacaaagtaacg
aaacaaagggatccagagattggtcagcagagtctgctctttcagattgactatcctgag
attgcagagggaattggacccagacaccgcttcatgtccgcgtatgagcaacgtattgag
cctccagaccgtcgctggcagtatctgcttctggcagccgagccctacgaaactattgca
tttaaggtcccgagcagagagatagacaaatcagaaagtcgcttctggactcactggaac
agagaaacgaaacaatttttccttcagttccattttaaaatggagaaacttctgcctcag
cctggcggacaggcagctcctgccaccatcaagcgcccgcctcctctgatgaccggcctt
ggtgctcgaccgcccactgacgccatgcccccaccaccacccggaggaattccagggatg
ccccctcctccaccccacgcccctccacagatgtcccatgcctctggcatgcctcctcct
ggtgctctgccaccccacctgcgtccaccattacctgctgatggaccaccaagcaactga

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