Ictalurus punctatus (channel catfish): 108280931
Help
Entry
108280931 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase rnf152
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108280931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108280931
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108280931
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108280931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4_2
zf-RING_4
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-GeneID:
108280931
NCBI-ProteinID:
XP_017351929
Ensembl:
ENSIPUG00000002227
UniProt:
W5UFC1
LinkDB
All DBs
Position
20:complement(1733505..1741184)
Genome browser
AA seq
174 aa
AA seq
DB search
METFSRPECQICFNPFSPRRRPKLLECRHTCCSVCLHQMVLNHREVRCPWCRRVTHLSGL
SVFQLPDDPEALSAITLVHTPVFIRLPDSSCYLLPLSVDEHGSFKSPDGTTGRPERLVPG
EDDQAEGRDTTMKSSAWTWFCTVLLVAIILIFLLAIVLHNMSCVSKRFSIISCG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttctctagaccggagtgccagatctgctttaacccgttcagccctcgacga
cggcccaaacttctggagtgcaggcacacgtgctgctcggtatgtttgcatcagatggtg
ttgaatcacagggaagtccgctgcccctggtgccgccgtgtcacgcatctcagcggcctc
tccgtgttccagctcccagacgatccggaagcactctcggccatcaccttggtgcacacg
cccgtttttatccggctgcccgatagcagctgttacctgctgcctctgtcagtggatgaa
cacggcagcttcaaaagcccagatgggacgaccggacgtcctgaacgtctcgtacccgga
gaggacgatcaggctgaggggagagacaccacgatgaagagttcagcctggacctggttc
tgcaccgtcctcctggtagccatcatcctcatcttcctcctggccatcgtcctgcacaac
atgtcttgcgtgtccaaacgcttcagcatcatttcctgcggatga
DBGET
integrated database retrieval system
